PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr013836.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 358aa    MW: 39512.1 Da    PI: 4.8706
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr013836.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM62.41.4e-19111362128
          NAM   2 ppGfrFhPtdeelvveyLkkk.vegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                  p G+rFhPtd+elv  yL+ + ++gk+l +  +i + +++ ++ Pw + +++ +    +++++fF + ++   +g+r++r + + g+W+ t +dk + 
  Pbr013836.1  11 PLGCRFHPTDQELVASYLRVRaLAGKPLGI-PFIYDYNLFgQTPPWVIWENLGGnslLDQDLFFFYELRS---SGSRSKRqIEAGGTWSGTSSDKVLG 104
                  78****************988255566666.779999877267899996533332224567888888766...4778888455589*******99888 PP

          NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +g+++g k+ + + ++ ++  ++ dW+++ey+l
  Pbr013836.1 105 L-DGNQIGEKRHFKYTNKGSE--NNGDWLLEEYSL 136
                  8.999**********944333..478*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.67E-224152IPR003441NAC domain
PROSITE profilePS5100526.52810154IPR003441NAC domain
PfamPF023658.0E-1511136IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MRMPLGYWGA PLGCRFHPTD QELVASYLRV RALAGKPLGI PFIYDYNLFG QTPPWVIWEN  60
LGGNSLLDQD LFFFYELRSS GSRSKRQIEA GGTWSGTSSD KVLGLDGNQI GEKRHFKYTN  120
KGSENNGDWL LEEYSLLPSA VAGAKVVLSR LKRNPRSRCG NKMDSSVPTP EFNEKPPVKR  180
AGKQVLNEKP PVKRKRARTE ELNQKPSVKE EKKEVGSQTN TSASVVTIGE LQDCPSTSSS  240
PDEGNRMIGE TANNDQECIS NIHGNANMTN FSVHDYVPLM SDVCSDPICL GGEGGGTTSD  300
EEIILHAEFL LGFDQWLGTV EGESPQEHPQ IDECSQPSDG IKYWTDCLWM SDSANDQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr013836.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018506180.10.0PREDICTED: NAC domain-containing protein 41-like
TrEMBLA0A498JXP80.0A0A498JXP8_MALDO; Histone-lysine N-methyltransferase
STRINGXP_009339913.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1307323
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12260.13e-14NAC 007