PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr013502.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 547aa MW: 61170.9 Da PI: 5.0307 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 167.3 | 5.1e-52 | 14 | 141 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 lp GfrF+Ptdeel+++yL+ k++g++ ++ vi+e+d++k+ePwdLp + +++++ ew+fF+++d+ky++g+r nrat +gyWkatgkd++++s + Pbr013502.1 14 LPLGFRFRPTDEELIDYYLRSKINGNHGQV-AVIREIDVCKWEPWDLPglSVIQTTDPEWFFFCPQDRKYPNGHRLNRATIKGYWKATGKDRQIKS-D 109 699************************999.89***************6447778888**************************************.9 PP NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128 + l+g+kktLvf++grapkg++t+Wvmheyr Pbr013502.1 110 KILIGMKKTLVFHTGRAPKGKRTNWVMHEYRT 141 9*****************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 4.84E-60 | 6 | 164 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 55.516 | 14 | 164 | IPR003441 | NAC domain |
Pfam | PF02365 | 4.3E-27 | 15 | 140 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 547 aa Download sequence Send to blast |
MLVADMETLS MDSLPLGFRF RPTDEELIDY YLRSKINGNH GQVAVIREID VCKWEPWDLP 60 GLSVIQTTDP EWFFFCPQDR KYPNGHRLNR ATIKGYWKAT GKDRQIKSDK ILIGMKKTLV 120 FHTGRAPKGK RTNWVMHEYR TTQKELDGTN PGQSSFVLCR LFKKQDETIE DSNFDEAEPT 180 VSSSTAALSS PQDVQSDHAP LPTSPSLERQ DERPLTKVEC TSADNCNAMG SDTLPPLPPI 240 EFPSNNCSGY DAEDQLHMPL GELNMFYDHP QEPLFSPLHS QMHAELGYYG RNDFSPPDDQ 300 DTYVCEFLSS IFNSSGEQID VDGRAAELPF EPELQNPVQP EGNIDRNGPS PLMSIPENYG 360 QSSRSQVTSN HLNAMINCDA AHLNAIISRD AGTEIRLRPR QTQNPTSAES FVTQGDANRR 420 LLILTKFLQL KCSSRPEDRE IKPIAMEEIS NNKKKPIGAV ATDVISADID LPEKGTVPTR 480 PNLTTEGRIV TGKRVPSLFF KASPAGQSMW SFAFLFRVVV VACWFIILIA YGDFISFEAV 540 GRPFAA* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 2e-45 | 1 | 165 | 4 | 166 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 2e-45 | 1 | 165 | 4 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 2e-45 | 1 | 165 | 4 | 166 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 2e-45 | 1 | 165 | 4 | 166 | NO APICAL MERISTEM PROTEIN |
3swm_A | 2e-45 | 1 | 165 | 7 | 169 | NAC domain-containing protein 19 |
3swm_B | 2e-45 | 1 | 165 | 7 | 169 | NAC domain-containing protein 19 |
3swm_C | 2e-45 | 1 | 165 | 7 | 169 | NAC domain-containing protein 19 |
3swm_D | 2e-45 | 1 | 165 | 7 | 169 | NAC domain-containing protein 19 |
3swp_A | 2e-45 | 1 | 165 | 7 | 169 | NAC domain-containing protein 19 |
3swp_B | 2e-45 | 1 | 165 | 7 | 169 | NAC domain-containing protein 19 |
3swp_C | 2e-45 | 1 | 165 | 7 | 169 | NAC domain-containing protein 19 |
3swp_D | 2e-45 | 1 | 165 | 7 | 169 | NAC domain-containing protein 19 |
4dul_A | 2e-45 | 1 | 165 | 4 | 166 | NAC domain-containing protein 19 |
4dul_B | 2e-45 | 1 | 165 | 4 | 166 | NAC domain-containing protein 19 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr013502.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009351898.1 | 0.0 | PREDICTED: NAC domain-containing protein 91-like | ||||
TrEMBL | A0A498KR67 | 0.0 | A0A498KR67_MALDO; Uncharacterized protein | ||||
STRING | XP_009351898.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5551 | 33 | 53 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24590.2 | 8e-98 | TCV-interacting protein |