PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr013111.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 482aa    MW: 54319.3 Da    PI: 4.5445
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr013111.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM48.13.9e-1591513128
          NAM   3 pGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpk........kvkaeek.ewyfFskrdkkyatgkrknr.atksgyW 83 
                  pG+rF+Ptd+elv  +L+  + +++      + +++++++++  +k++P+++ +        ++ a+++  +yfFs+ +kk++ g++  r +   g+W
  Pbr013111.1   9 PGLRFKPTDQELVGGFLHYFLVKTPrllppPPHSTFMHKCNLfgNKFQPSQIWEafgggaalQLGATDQpAMYFFSELKKKTPMGSNVDRrMGLGGTW 106
                  9****************99998888898875555679***9833589*****74478888764444444488************99999845669*** PP

          NAM  84 katgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  + +     +  +  +++ +gl+kt+ + +  + +  +  W ++ey+l
  Pbr013111.1 107 EGKSVPAWIEGTegNSTCIGLRKTFWYKN--EGSEDHGGWKLDEYSL 151
                  *99998888877556666*******9973..3333589*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100520.9657176IPR003441NAC domain
SuperFamilySSF1019411.7E-168175IPR003441NAC domain
PfamPF023652.2E-119151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 482 aa     Download sequence    Send to blast
MENHSLARPG LRFKPTDQEL VGGFLHYFLV KTPRLLPPPP HSTFMHKCNL FGNKFQPSQI  60
WEAFGGGAAL QLGATDQPAM YFFSELKKKT PMGSNVDRRM GLGGTWEGKS VPAWIEGTEG  120
NSTCIGLRKT FWYKNEGSED HGGWKLDEYS LFASPRKRNS HTSYDFDFVL CRLRNTSGIN  180
KRKCSTSYSQ DDEVPKMKKK RANEEIEQDM HAINSHTSYD FDFVLCRLRN TSGINKRKCS  240
TSYSQDDEVP KMKKKRANEE IEQDMHAINV VDEEGRQGNS CLTSNFVLSD QENNEFMVGD  300
YVDYGYDDND LRLTITADEL DDVLAKEPTD GAVEAPFPTA SASEELLLDK ERKDVQLLVS  360
SVVADGGVED QALYTNMSGE LIPETRELPL PASSGTAEDG TVEEKAWDPS LLEQYWLSET  420
QEEEPRNPSF YRDFMFADGG GVEEAYHPSA FDNVFDQSLF GSSYLNSYSF TEGQFMPHIL  480
M*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1235255KRKCSTSYSQDDEVPKMKKKR
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr013111.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028956331.10.0NAC domain-containing protein 102-like
TrEMBLA0A498KEC10.0A0A498KEC1_MALDO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF2762723
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G01720.12e-07NAC family protein