PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr013109.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 407aa    MW: 45650.7 Da    PI: 4.3558
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr013109.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM49.61.3e-1581512128
          NAM   2 ppGfrFhPtdeelvveyLkkkvegkk.....leleevikevdi..ykvePwdLpk........kvkaeek.ewyfFskrdkkyatgkrknratk.sgy 82 
                  ppG+rF+Ptd+el+  +L+  + +++      + +++++ +++  +k++P+++ +        +++a ++  +yfFs+ +k +++g++  r++   g+
  Pbr013109.1   8 PPGVRFKPTDQELIGTFLHYFLLKTPrllppPPHNTFMHMCNLfgNKSQPSQIWEafgggaalQLAAADQpALYFFSELKKITPEGSNVDRKMGlGGT 105
                  9*******************9999998998744445577777622689*****74478888774444444488******************665599* PP

          NAM  83 Wkatgkdkevlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                  W+ +     v  +  +++ +glk+t+ + +  + +  +  W ++ey+l
  Pbr013109.1 106 WEGKSVPAWVEGTegNSTCIGLKRTFWYKN--EGSEDHGGWKLDEYSL 151
                  **88888888776556666*******9973..3333589*******87 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.53E-185175IPR003441NAC domain
PROSITE profilePS5100521.5597176IPR003441NAC domain
PfamPF023651.9E-128151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 407 aa     Download sequence    Send to blast
MENHSLFPPG VRFKPTDQEL IGTFLHYFLL KTPRLLPPPP HNTFMHMCNL FGNKSQPSQI  60
WEAFGGGAAL QLAAADQPAL YFFSELKKIT PEGSNVDRKM GLGGTWEGKS VPAWVEGTEG  120
NSTCIGLKRT FWYKNEGSED HGGWKLDEYS LFASPRKRNS HTRYDFDFVL CRLRNTSGIN  180
KRKCSTSSSQ DDEVPKMKKQ RPNEEIEQNM HAINVEEEGR QGNYSCLTSN SVVCYQENDE  240
FAVGDYVDYG YDDNDPRLTF TVAELDKILA KEPTDGAVEV LFPTASASEE LLLGKERQEV  300
PLSVSSTVVV AHGEVEDEAL NPNMLEELIH ETRELTLPAS SGTAEDGTVE EKAWDPSLLE  360
QYWLAETQEE EPLNPSFYRD FMFADGGVEE AYHPSAFDNV VDQSLF*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr013109.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028956331.10.0NAC domain-containing protein 102-like
TrEMBLA0A498KEC10.0A0A498KEC1_MALDO; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF15308210
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01520.12e-06NAC domain containing protein 67