PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr013071.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | NAC | ||||||||
Protein Properties | Length: 88aa MW: 9899.17 Da PI: 5.5597 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 27.5 | 8.8e-09 | 7 | 85 | 1 | 73 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpk.....kvkaeekewyfFskrdkkyatgkr 73 +p Gfr +Ptd+e v ++L + +e+ + l+ +++++++ +k+eP+++ + +++ ++ +y Fs+ ++ +++g+ Pbr013071.1 7 VPLGFRLKPTDQEFVGHFLYNFLENIPlLPPHNTLSNIFGNKSEPSEIWEayggtQLADDQPALYLFSELKRLNPKGTA 85 589***********************9756667799**99********7435554444455588******999998875 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 3.01E-8 | 5 | 85 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 11.692 | 7 | 87 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.6E-4 | 8 | 77 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 88 aa Download sequence Send to blast |
MENHSLVPLG FRLKPTDQEF VGHFLYNFLE NIPLLPPHNT LSNIFGNKSE PSEIWEAYGG 60 TQLADDQPAL YLFSELKRLN PKGTARN* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr013071.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028956332.1 | 2e-45 | uncharacterized protein LOC114824097 | ||||
TrEMBL | A0A498KEC1 | 5e-44 | A0A498KEC1_MALDO; Uncharacterized protein | ||||
STRING | XP_009358388.1 | 7e-44 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF15308 | 2 | 10 |