|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pbr012883.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
Family |
NAC |
Protein Properties |
Length: 306aa MW: 35353.3 Da PI: 6.5656 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr012883.1 | genome | CPETR | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 75.9 | 9.6e-24 | 7 | 144 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykv.ePwdLpk.........kvka..eekewyfFskrdkkyatgkrknra..tksgyWk 84
+p+G+rF P+d+el+ +yL+++++g++ + +++++d+y + eP+d+ + + + +k++y F++ ++k+++g+r r+ t+ g+Wk
Pbr012883.1 7 VPVGYRFMPRDDELLLDYLRPRLDGQDYPK-GIVHDCDLYGLeEPSDIWRrlnrashegH--EctVDKDIYVFTTLNSKAPNGSRFCRTvgTTGGTWK 101
599************************999.89*******9978****643555544431..02245688******************645779**** PP
NAM 85 atgkdkevlsk.kgelvglkktLvfykgrapkgektdWvmheyrl 128
k+++++ ++++g +k +++ ++ + +++ +W+mhe++l
Pbr012883.1 102 GEDAGKKIYASgIKHAIGFRKRFTYRNKGS--PQNDHWIMHEFHL 144
*********9855677*********95444..459*********8 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 306 aa
Download sequence Send
to blast |
MAGYYHVPVG YRFMPRDDEL LLDYLRPRLD GQDYPKGIVH DCDLYGLEEP SDIWRRLNRA 60 SHEGHECTVD KDIYVFTTLN SKAPNGSRFC RTVGTTGGTW KGEDAGKKIY ASGIKHAIGF 120 RKRFTYRNKG SPQNDHWIMH EFHLDPSLLR NKHHQEKNIV LCILKRKDDI SKKRKLEERD 180 NYEENAANHF QPLALNAINV GDYNNAPIYM EQIAFDHSQP LALTATTIRD YSIDPRYPEE 240 NAANQFQPQD LYAATTGDYS NAHWYTKQNA ADHFEPHDEE RNATNEDLTT VLRRMEEILM 300 SGFRG*
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 1e-15 | 7 | 173 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 1e-15 | 7 | 173 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 1e-15 | 7 | 173 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 1e-15 | 7 | 173 | 17 | 171 | NO APICAL MERISTEM PROTEIN |
3swm_A | 1e-15 | 7 | 173 | 20 | 174 | NAC domain-containing protein 19 |
3swm_B | 1e-15 | 7 | 173 | 20 | 174 | NAC domain-containing protein 19 |
3swm_C | 1e-15 | 7 | 173 | 20 | 174 | NAC domain-containing protein 19 |
3swm_D | 1e-15 | 7 | 173 | 20 | 174 | NAC domain-containing protein 19 |
3swp_A | 1e-15 | 7 | 173 | 20 | 174 | NAC domain-containing protein 19 |
3swp_B | 1e-15 | 7 | 173 | 20 | 174 | NAC domain-containing protein 19 |
3swp_C | 1e-15 | 7 | 173 | 20 | 174 | NAC domain-containing protein 19 |
3swp_D | 1e-15 | 7 | 173 | 20 | 174 | NAC domain-containing protein 19 |
4dul_A | 1e-15 | 7 | 173 | 17 | 171 | NAC domain-containing protein 19 |
4dul_B | 1e-15 | 7 | 173 | 17 | 171 | NAC domain-containing protein 19 |
Search in ModeBase |