PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pbr012802.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family | bZIP | ||||||||
Protein Properties | Length: 426aa MW: 47849 Da PI: 7.3558 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 25.5 | 2.9e-08 | 68 | 126 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 +r rr + NRe+Ar +R++a +eeL++k++ L eN+ Lk + e ke ++l++ + Pbr012802.1 68 RRIRRIMANRESARQTIRRRQALCEELTTKAADLALENENLKRKKELAVKEFQSLEKTN 126 799****************************************9999999999999877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF47226 | 3.53E-7 | 8 | 66 | IPR008207 | Signal transduction histidine kinase, phosphotransfer (Hpt) domain |
SMART | SM00338 | 2.1E-6 | 66 | 128 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.53 | 66 | 129 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.5E-5 | 66 | 125 | No hit | No description |
Pfam | PF00170 | 5.6E-7 | 68 | 126 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.25E-5 | 68 | 120 | No hit | No description |
CDD | cd14702 | 4.98E-14 | 69 | 120 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0000160 | Biological Process | phosphorelay signal transduction system | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0004871 | Molecular Function | signal transducer activity | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 426 aa Download sequence Send to blast |
MALPELKAQI KILVQSMLHE GMLVYQFTQP QELQDSSNPN FVAEIIKLFC DNTEKVITEL 60 EQHFYEERRI RRIMANRESA RQTIRRRQAL CEELTTKAAD LALENENLKR KKELAVKEFQ 120 SLEKTNKHLK VQMAKVIKAE DQEAPAKNMS AYVQMQIPPS SPTNSPFFLF NRPPFTPLFW 180 PPVIQSSNSI QVQHVLQNPT AVLSNISLPA NGTAESSLDQ ENPPNINGAR TPLYVFPCPW 240 FIPHFDNGNG LQPQSSLCLN NKQEETSFNN QYSSSSSSRA ATQLDNHQPS LPVRLKTEDS 300 ASIEGRPSHD LNETPVQFPL DEGDQHTGPH PKENGCKEIF VSPSSLNHAG VASCIKHENG 360 FEPDYTVTVD NSYHKFSALP EKNSEPIVYP TGKLADAIAA AEARKRRKKL TKLKNLHGRQ 420 CQTQC* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Pbr012802.1 |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_009370680.1 | 0.0 | PREDICTED: uncharacterized protein LOC103960020 | ||||
TrEMBL | A0A498I2V3 | 0.0 | A0A498I2V3_MALDO; Uncharacterized protein | ||||
STRING | XP_009370680.1 | 0.0 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6400 | 28 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G19490.1 | 5e-54 | bZIP family protein |