 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pbr010927.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
| Family |
Trihelix |
| Protein Properties |
Length: 242aa MW: 27339.1 Da PI: 9.5546 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pbr010927.1 | genome | CPETR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 39.2 | 1.8e-12 | 16 | 100 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm...rergf..erspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W + + aLi+a ++ +l+ g l+++ W+ev++++ + +g+ +++ +qC+++++ l+k+yk +k + s++p++++l+
Pbr010927.1 16 CWNEADTEALITAWGDRYLHLNHGILRQKEWKEVADAVnstQNGGVkpSKTDVQCRNRIDTLKKKYKLEKSKPGP------SKWPFYRRLH 100
7*************************************99977777557899***************99988886......58*****997 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MNRRTRTHAP AGREDCWNEA DTEALITAWG DRYLHLNHGI LRQKEWKEVA DAVNSTQNGG 60
VKPSKTDVQC RNRIDTLKKK YKLEKSKPGP SKWPFYRRLH SLICSTPSNA AVSTESKPPI 120
LALNGKSPDP SPYPLEGSRR DDGGDEAAGL SGGAVCRELA RAISRFGEMY ERIENSKRKQ 180
MMELEKQRME FDKELELQRL NMFMDVQVEL GKKMKLSTYS HSSGPAIAES FMSSFLVIFD 240
R*
|
| Best hit in Arabidopsis thaliana ? help
Back to Top |
| Hit ID |
E-value |
Description |
| AT5G05550.2 | 3e-55 | sequence-specific DNA binding transcription factors |
