|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pbr009270.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
Family |
NAC |
Protein Properties |
Length: 381aa MW: 43519.9 Da PI: 6.7897 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr009270.1 | genome | CPETR | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 126.8 | 1.7e-39 | 9 | 131 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97
lppG+rFhPt+eel+ yL +k+++ ++++ ++i++vdi+k+ePw+Lp+k+k +e+e+yfFs d k++ ++ +t++gyW+atg+dk ++++ ++
Pbr009270.1 9 LPPGLRFHPTEEELI-TYLMNKINDATFTV-RAIADVDINKCEPWELPAKAKMGENECYFFSLGDWKNS----TTLITNTGYWRATGRDKVIYNSvTS 100
79*************.9***********99.89***************99999***********99875....5678999*************99888 PP
NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128
+ g++kt vfy gr p+g+k++W+mheyr+
Pbr009270.1 101 KRAGMRKTRVFYIGRVPNGKKSNWIMHEYRI 131
99***************************97 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 381 aa
Download sequence Send
to blast |
MTAEPKEELP PGLRFHPTEE ELITYLMNKI NDATFTVRAI ADVDINKCEP WELPAKAKMG 60 ENECYFFSLG DWKNSTTLIT NTGYWRATGR DKVIYNSVTS KRAGMRKTRV FYIGRVPNGK 120 KSNWIMHEYR IDSKSDFRTS KNEWVICRVF QKGKDINEYP TNQSRAANPH NLEIGPSMVP 180 SPLMQLGDPN HHQFPYGRNY MTSTALETSS SSSPCSSSSS SSSSSSSSPY DVFLSFNGED 240 TRKTFTDHLY WTMKDAGIDF FMEENESIRR GENMSDKVKQ IIEGSRVSVI VFSSRYADSI 300 WCLEELVHIV ECRRTLKQIV LPIFYDLSPS DAMGTFALAI QKHREHFNKD TDKEEKIQRW 360 TDALTEGADL TTWVFRTTNG *
|
3D Structure ? help Back to Top |
|
PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 4e-40 | 9 | 152 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 4e-40 | 9 | 152 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 4e-40 | 9 | 152 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 4e-40 | 9 | 152 | 17 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 5e-40 | 9 | 152 | 20 | 168 | NAC domain-containing protein 19 |
3swm_B | 5e-40 | 9 | 152 | 20 | 168 | NAC domain-containing protein 19 |
3swm_C | 5e-40 | 9 | 152 | 20 | 168 | NAC domain-containing protein 19 |
3swm_D | 5e-40 | 9 | 152 | 20 | 168 | NAC domain-containing protein 19 |
3swp_A | 5e-40 | 9 | 152 | 20 | 168 | NAC domain-containing protein 19 |
3swp_B | 5e-40 | 9 | 152 | 20 | 168 | NAC domain-containing protein 19 |
3swp_C | 5e-40 | 9 | 152 | 20 | 168 | NAC domain-containing protein 19 |
3swp_D | 5e-40 | 9 | 152 | 20 | 168 | NAC domain-containing protein 19 |
4dul_A | 4e-40 | 9 | 152 | 17 | 165 | NAC domain-containing protein 19 |
4dul_B | 4e-40 | 9 | 152 | 17 | 165 | NAC domain-containing protein 19 |
Search in ModeBase |