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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr008788.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
GATA |
Protein Properties |
Length: 353aa MW: 38638.7 Da PI: 6.268 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr008788.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 52.3 | 7.6e-17 | 239 | 273 | 1 | 35 |
GATA 1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
C +C t kTp+WR g g+ktLCnaCG++y++ +l
Pbr008788.1 239 CLHCATDKTPQWRTGAMGPKTLCNACGVRYKSGRL 273
99*****************************9885 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0007623 | Biological Process | circadian rhythm |
GO:0009416 | Biological Process | response to light stimulus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 353 aa
Download sequence Send
to blast |
MEAPEYYQNS FCPQFAPEKR HPFDNNKTAV GSGGGDHFKV EDLLDFSNDD DAVITDGGCP 60 AAAVFENAAG NSTDSSTLTV LDSCNSSSLS GSEPLFGSRN LADGPLSSEL CVPYDDLAEL 120 EWLSNFVEES FSSEDLQRLQ LISGMKARPD EAASETRLLQ PDPXXXXXXX XXXXXXXXXX 180 XXXXXXXXXX XXXXXXSAAE AATPLPQPSS TGKKTVKSAP KKKESQEGSG GGHGDGRKCL 240 HCATDKTPQW RTGAMGPKTL CNACGVRYKS GRLVPEYRPA ASPTFVLTKH SNSHRKVLEL 300 RRQKEMGRAQ QTYIHQVPPP HHHHHQNMVF DVSNGGDYLI HQHVGPDFRQ LI*
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