 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pbr007956.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
| Family |
WRKY |
| Protein Properties |
Length: 349aa MW: 37824.9 Da PI: 7.5261 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pbr007956.1 | genome | CPETR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 98 | 6.1e-31 | 170 | 228 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
+D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+ver+++dp+++++tY+ eHnh+
Pbr007956.1 170 SDIWAWRKYGQKPIKGSPYPRGYYRCSSSkGCMARKQVERNKSDPNIFIVTYTAEHNHP 228
79*************************998****************************7 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 349 aa
Download sequence Send
to blast |
MEDDWDLQAV VRGCFTATTT SNTTTTSTRA SSTAATTSLN ISGFHSNPAA ASFSSFDQTS 60
QQQQLLFCLP LSDPIIKPKS AIEELHDLYR PFYPKSQPPL SSPQITPPTL SPLTSLSSLT 120
TPKDQTHPIQ YHRQQQTQHS KPSSSTTARS KKRKNQLKKV CQVPAEGLSS DIWAWRKYGQ 180
KPIKGSPYPR GYYRCSSSKG CMARKQVERN KSDPNIFIVT YTAEHNHPAP THRNSLAGST 240
RQKPLSPQKT TGGDSAKPTS PTTSASVDEE PVVAGRSTTV ESSCKEEKGS PLITDEEDEL 300
LGICDSVVSD DFFEGLDGLA EDYFSDHSPV SFGMPWISSS AATAAGSI*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 147 | 155 | ARSKKRKNQ |
