PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus

Family

MYB_related

Protein Properties

Length: 338aa MW: 37111.1 Da PI: 9.2818

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pbr007941.2	genome	CPETR	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	41.2	3.8e-13	82	126	1	47
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 r +WT +E++++++a +++ + Wk+I + +g +t q++s+ qky Pbr007941.2 82 RESWTDQEHDKFLEALQLFDRD-WKKIESFVG-SKTVIQIRSHAQKY 126 789***************77.*****.***********9 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF46689	9.72E-17	76	132	IPR009057	Homeodomain-like
PROSITE profile	PS51294	14.847	77	131	IPR017930	Myb domain
Gene3D	G3DSA:1.10.10.60	1.3E-6	80	132	IPR009057	Homeodomain-like
TIGRFAMs	TIGR01557	4.7E-18	80	129	IPR006447	Myb domain, plants
SMART	SM00717	8.6E-11	81	129	IPR001005	SANT/Myb domain
Pfam	PF00249	1.1E-10	82	126	IPR001005	SANT/Myb domain
CDD	cd00167	4.67E-8	84	127	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 338 aa Download sequence Send to blast
MVSVNPNPPQ GFYLFDPMNM GLPGLSSMPP PPPPTTGAAS ATAATSTTAA CTPSSATANA 60 ASMSADDQSK KIRKPYTITK SRESWTDQEH DKFLEALQLF DRDWKKIESF VGSKTVIQIR 120 SHAQKYFLKV QKKGTSEHVP PPRPKRKATH PYPQKAPKSA AVVSQIAGPF QSSSDLLEHR 180 YVYQPDSSFV LGTPVNAATL SSWSCNSVPP VNMSQTKDEG RLSGPTVTHN SCYSSSNESN 240 PINCKMRETV DGVGPGQPQR VLLVLTIVPV YAVLPDFAQV YKFIGSVFDP STTNHMERLR 300 QLDPINLETA FLLMRNLSIN LTRPEFEDHV SIHRLHF*

Functional Description ? help Back to Top
Source	Description
UniProt	Probable transcription factor. {ECO:0000250}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	Pbr007941.2

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009366556.1	0.0	PREDICTED: protein REVEILLE 3-like isoform X1
Swissprot	C0SVG5	3e-93	RVE5_ARATH; Protein REVEILLE 5
TrEMBL	A0A498JEU2	0.0	A0A498JEU2_MALDO; Uncharacterized protein
STRING	XP_009366556.1	0.0	(Pyrus x bretschneideri)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF1119	33	96

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G01280.2	9e-91	MYB_related family protein

Publications ? help Back to Top
Gray JA,Shalit-Kaneh A,Chu DN,Hsu PY,Harmer SL The REVEILLE Clock Genes Inhibit Growth of Juvenile and Adult Plants by Control of Cell Size. Plant Physiol., 2017. 173(4): p. 2308-2322 [PMID:28254761]