PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr007757.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family bHLH
Protein Properties Length: 449aa    MW: 49152 Da    PI: 9.2382
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr007757.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH18.63.5e-06301342955
                  HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                   r+RR+r+ ++   L++llP++     kK++ a++  +A +YI+ Lq
  Pbr007757.1 301 ARQRRQRLSDKTRCLQKLLPWD-----KKMDSATTYGEAYKYIQFLQ 342
                  69*******************9.....8******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088811.655292341IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474591.31E-9294352IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.1E-7298347IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000837.73E-6298346No hitNo description
Gene3DG3DSA:4.10.280.103.5E-7301349IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 449 aa     Download sequence    Send to blast
MDETERQLRR AILSLSGRAD GGGEKDTAFV TTGWDEEEAT FNAIMSSGIT FQPFLPITAS  60
ASAAHHHQNP MLPSSPSLKP LPYSNFAQDT LTNVSPATAA ASDYSQIPRL AKHEPISSYQ  120
DYFPTPTFYD YPPDLNLLPN THFSPPPPRH LQHHDCESND YSSIFQHLPD LLPLDPSNYF  180
PCSSSSSSSY KRPRFVDSHH FCYPSASFAA AVAAQNFHPY PPLPHFNNTT LFPPLNNYGF  240
RPSSSSQSSS HANAPTPPPP PPPAPHVKTK RRITTPSPSL PGSALARERR QRLCLPGSAL  300
ARQRRQRLSD KTRCLQKLLP WDKKMDSATT YGEAYKYIQF LQAQLSALQT MPVLTPPTTS  360
IATSSGRVGG GPGERXXXXT SSGSVGGELE RLSRNQLLQV LLNSPSAQTV MYSRGCCVFS  420
VEQLDQISRR FSRKMGSSTA SKSSPPSS*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr007757.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028953435.10.0uncharacterized protein LOC114822682
TrEMBLA0A498HG820.0A0A498HG82_MALDO; Uncharacterized protein
STRINGXP_009350683.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF134262124
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22100.13e-24bHLH family protein