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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr005446.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
ERF |
Protein Properties |
Length: 324aa MW: 35816.3 Da PI: 7.1285 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr005446.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66.4 | 5.6e-21 | 132 | 181 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a+++a++kl+g
Pbr005446.1 132 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDKAALKLRG 181
59******9.**********955...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 324 aa
Download sequence Send
to blast |
MAKAIDLYSS STMTPDLADL LGEDQLMKAL MPFMKSASST SPSTSYSYPP QNNQNFNLYF 60 CSSPMISQAG AIGLNQLIPS QILQIQSQMI RQQHQQKQQI SAFASSAAYL KLLSTKAIPM 120 KTAGTPSKLT KLYRGVRQRH WGKWVAEIRL PRNRTRLWLG TFDTAEEAAL AYDKAALKLR 180 GDFARLNFPH LKQQGAHVSG AFGHYKPLHS SVDAKLQAIC QSLAANSMKQ GNTGEPCSVA 240 ETKPVVSAPS ETRMDDSFKT ELKSEWEAFS SSSSSPFWSD RSDESSTPES DITFLDFSDS 300 QWDEAENFGL EKFPSVEIDW SAI*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU732458 | 0.0 | GU732458.1 Malus x domestica AP2 domain class transcription factor (AP2D34) mRNA, complete cds. |