PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr005265.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 278aa    MW: 31036.2 Da    PI: 4.7576
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr005265.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM38.34.1e-12281513110
          NAM   3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevls 94 
                  +G  F+P+ e ++ +yL +k++g+ +++e+vi+++d+ k  P d ++      ++ ae+++ yf+++++     + +++r t++gyWk   +++  ++
  Pbr005265.1  28 RGESFNPNPETILIKYLFNKLAGRATPVEDVIRHIDLQKGMPPDANQippslfCHGAENRSAYFYICAEVVL-GDVKTERPTSNGYWKLLSNEQVHIQ 124
                  6889***********************************99988864566776666677799***9998876.57899**********8776544333 PP

          NAM  95 k..kgel.........vglkktLvfy..k 110
                  +  +            vg  +t  +y  +
  Pbr005265.1 125 TssD--SdddavavvhVGNVRTWRYYgrD 151
                  3341..13455666668888898888431 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100513.18726188IPR003441NAC domain
SuperFamilySSF1019411.11E-828175IPR003441NAC domain
PfamPF023651.9E-629170IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 278 aa     Download sequence    Send to blast
MSNTDHSFDI IAASTVTESC TEADLNKRGE SFNPNPETIL IKYLFNKLAG RATPVEDVIR  60
HIDLQKGMPP DANQIPPSLF CHGAENRSAY FYICAEVVLG DVKTERPTSN GYWKLLSNEQ  120
VHIQTSSDSD DDAVAVVHVG NVRTWRYYGR DLRRPMRAVS ETCFKIREYY LNPELEPTTL  180
IVTGLYLGCF FKKLCVCEFI DEDSELRLKQ KYKVATLAIS GGDPLFILPG HLPIGPRLIC  240
ALLDAPEPGG DPLDTLFIRA PPPSPSSPWK EESDDEW*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr005265.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018504858.10.0PREDICTED: uncharacterized protein LOC108867767
TrEMBLA0A498J3E60.0A0A498J3E6_MALDO; Uncharacterized protein
STRINGXP_008359195.11e-180(Malus domestica)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1040822