|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pbr004761.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
Family |
GATA |
Protein Properties |
Length: 362aa MW: 38887.9 Da PI: 4.4464 |
Description |
GATA family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr004761.1 | genome | CPETR | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GATA | 49.7 | 5e-16 | 209 | 245 | 1 | 35 |
GATA 1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35
C++Cg+++ Tp +Rrgp g++tLCnaCGl+++ kg+
Pbr004761.1 209 CQHCGVSEnnTPAMRRGPAGPRTLCNACGLMWANKGT 245
*******99*************************997 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0005515 | Molecular Function | protein binding |
GO:0008270 | Molecular Function | zinc ion binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 362 aa
Download sequence Send
to blast |
MAAVNPQPLE AGPFEEHGRG PIQVEDDDGD YEDGGDDGME DMEEVHVNPV SVAERGGGGG 60 GGGGGGAGMA SRTSELTLSF EGEVYVFPAV TPEKVQAVLL LLGGRDVPTG VPTVEVSYNQ 120 NPRGVGDTPK RSNLSRRIAS LVRFREKRKE RCFDKKIRYT VRKEVAQRML RKNGQFASLK 180 QTSGASSWDS TQSCLQDGTP QPETVVRRCQ HCGVSENNTP AMRRGPAGPR TLCNACGLMW 240 ANKGTLRDLS KGGRNLTMDN IEPGTPTEVK PSVVEGEFSR NQDERGILDG LSKNVTEGSN 300 DASVNPDDEE CIAFKDLHET AEDLTNSYPM GIVSSANDEQ EPLAELANPA DTDLDITTNF 360 D*
|
Functional Description ? help
Back to Top |
Source |
Description |
UniProt | Transcriptional activator that specifically binds 5'-GATA-3' or 5'-GAT-3' motifs within gene promoters. {ECO:0000250, ECO:0000269|PubMed:14966217}. |