PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr002722.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family NAC
Protein Properties Length: 316aa    MW: 35663.6 Da    PI: 4.4002
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr002722.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM63.46.9e-2081371128
          NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiy.kvePwdLpkkvka...eekewyfFskrdkkyatgkrknr.atksgyWkatgkdkevl 93 
                  +p GfrFhPtd+el + yL+ ++ + k   +++++e++++ ++ Pw   +++ +    +++++fF + ++++ +++r++r + + g+W++t +dk + 
  Pbr002722.1   8 MPLGFRFHPTDQELFSSYLRDRALSGKPLGNRFVHEFNLFgQTPPWVVWEQFGGnslLDQDLFFFYELRSRSDSDSRSKRqIEAGGTWSETSSDKVLG 105
                  699*****************9987777666589****98725688888654433223456889999999999999999995556899******99888 PP

          NAM  94 skkgelvglkktLvfykgrapkgektdWvmheyrl 128
                    +g  +g k  + + ++   + ++  W+++ey+l
  Pbr002722.1 106 L-DGIPIGDKGHFRYNNK--GSNNNGGWLLEEYSL 137
                  8.9************843..333579*******97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.27E-235152IPR003441NAC domain
PROSITE profilePS5100526.518155IPR003441NAC domain
PfamPF023651.1E-139137IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    Send to blast
MEEGYYGMPL GFRFHPTDQE LFSSYLRDRA LSGKPLGNRF VHEFNLFGQT PPWVVWEQFG  60
GNSLLDQDLF FFYELRSRSD SDSRSKRQIE AGGTWSETSS DKVLGLDGIP IGDKGHFRYN  120
NKGSNNNGGW LLEEYSLLPN VVAGPKVVLS RLKRNPRSRC GSKMNSSNPT HDFNESNMIT  180
DINGNAKPTD FSDQDSVILM SDFPSYPICL ESDTSNHDQG CIIYIKGNVM PIPTHISDHE  240
YVPLMSDVPS SLIFLGGEEY PLDGEAVRGD IKEWLTTLEG KLPQEWPQID EFSQPLDGFN  300
YWTDCLWMSD SVNDQ*
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr002722.1
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028954569.10.0NAC domain-containing protein 41-like
TrEMBLA0A498K0F40.0A0A498K0F4_MALDO; Uncharacterized protein
STRINGXP_009344383.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF12591634
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G17260.17e-11NAC domain containing protein 86