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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr002685.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
WRKY |
Protein Properties |
Length: 398aa MW: 42845.4 Da PI: 9.6544 |
Description |
WRKY family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr002685.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRKY | 98.5 | 4.2e-31 | 328 | 386 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59
D+y+WrKYGqK++kgs++pr+YY+C++ gCp++k+ver+ +dp ++++tYegeH+h
Pbr002685.1 328 ADEYSWRKYGQKPIKGSPYPRGYYKCSTVrGCPARKHVERAPDDPAMLIVTYEGEHRHA 386
69************************9888****************************6 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 398 aa
Download sequence Send
to blast |
MTLELMNFPK MEDQKAIQEA ASQGLQSMEH LIRFLSYQQQ QSNNQSARVD CTDITDHTVS 60 KFKKVISLLN RTGHARFRRG PVQPIQPVHF PTSDPLSSQT LNLASALNLT PTPAPAPVTV 120 PAIVPPTPIE SCFVQSQPHS MTLDFTRPNA FASNPKSAEI EFAKESFSVS SSSSFMSSAI 180 TGDGSVSNGK LGSSIFLAPA PAVSGAKPPL STAPFKKRCH EHDQSDDTSC KFSGSIPGDG 240 SVSNGKLGSS IFLAPAPAVS GAKPPLSTAP FKKRCHEHDQ SDDTSCKFSG SGSASGSGKC 300 HCSKRRKNRV KKTIRVPAIS SKIADIPADE YSWRKYGQKP IKGSPYPRGY YKCSTVRGCP 360 ARKHVERAPD DPAMLIVTYE GEHRHARENV GLVFEST*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ996068 | 0.0 | KJ996068.1 Pyrus x bretschneideri WRKY domain class transcription factor (WRKY16) mRNA, complete cds. |