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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pbr002548.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
NAC |
Protein Properties |
Length: 352aa MW: 39815.2 Da PI: 4.7847 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr002548.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 180.6 | 4e-56 | 6 | 133 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96
lppGfrFhPtdeelv +yL +k++g+++el e+i+evd+yk+ePwdLp k + +++ ewyf+s+rd+ky++g+r+nrat++gyWkatgkd++v s +
Pbr002548.1 6 LPPGFRFHPTDEELVAYYLDRKINGRTIEL-EIIPEVDLYKCEPWDLPdKsFLPSKDMEWYFYSPRDRKYPNGSRTNRATRAGYWKATGKDRAVSS-Q 101
79****************************.99**************96435566888*************************************9.9 PP
NAM 97 gelvglkktLvfykgrapkgektdWvmheyrl 128
+++vg+kktLv+y+grap+g +t+Wvmheyrl
Pbr002548.1 102 SRAVGMKKTLVYYRGRAPHGIRTNWVMHEYRL 133
99****************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MAPMSLPPGF RFHPTDEELV AYYLDRKING RTIELEIIPE VDLYKCEPWD LPDKSFLPSK 60 DMEWYFYSPR DRKYPNGSRT NRATRAGYWK ATGKDRAVSS QSRAVGMKKT LVYYRGRAPH 120 GIRTNWVMHE YRLVDSVCAN ASSSLKDSYA LCRVFKKTIQ MPQNNKEEKP VGINNADKDS 180 IWVSNEQLFG KENSGINEGA SRGIETDQDG NYSNHDYPKF PSDTSSSDLT QGTPTENGIA 240 DDLQAPFTSD EANSSADLYS FGVHCSSDLI QETYIPHNTS VLNSYQFPYP PLQLEDFPQI 300 NLAAETKTAK PEIIDEYMLY DKFKGYMNGT FEEIFSLCSS QDNSVALSMQ D*
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3D Structure ? help Back to Top |
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PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
1ut4_A | 6e-61 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 6e-61 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 6e-61 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 6e-61 | 1 | 157 | 12 | 165 | NO APICAL MERISTEM PROTEIN |
3swm_A | 7e-61 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_B | 7e-61 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_C | 7e-61 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swm_D | 7e-61 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_A | 7e-61 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_B | 7e-61 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_C | 7e-61 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
3swp_D | 7e-61 | 1 | 157 | 15 | 168 | NAC domain-containing protein 19 |
4dul_A | 6e-61 | 1 | 157 | 12 | 165 | NAC domain-containing protein 19 |
4dul_B | 6e-61 | 1 | 157 | 12 | 165 | NAC domain-containing protein 19 |
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