PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr002083.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 713aa    MW: 75975.4 Da    PI: 5.4473
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr002083.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP260.44e-19512561255
          AP2   2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr ++ +gr++AeIrd ++    ++r++lg+f++ae+Aa+a++aa++ l+g
  Pbr002083.1 512 RYRGVRKRP-WGRFAAEIRDpWK----KTRVWLGTFDSAEDAARAYDAAARILRG 561
                  69*******.**********883....5***********************9998 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF514456.47E-9326342IPR017853Glycoside hydrolase superfamily
PfamPF003322.1E-9626342IPR000490Glycoside hydrolase family 17
Gene3DG3DSA:3.20.20.802.4E-12526342IPR013781Glycoside hydrolase, catalytic domain
PROSITE patternPS005870257270IPR000490Glycoside hydrolase family 17
SMARTSM007681.5E-41374455IPR012946X8 domain
PfamPF079835.3E-22374445IPR012946X8 domain
PfamPF008471.4E-11512561IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.101.0E-30512569IPR001471AP2/ERF domain
SMARTSM003809.1E-35512576IPR001471AP2/ERF domain
SuperFamilySSF541711.63E-21512571IPR016177DNA-binding domain
CDDcd000181.40E-17512571No hitNo description
PROSITE profilePS5103223.011512569IPR001471AP2/ERF domain
PRINTSPR003676.1E-10513524IPR001471AP2/ERF domain
PRINTSPR003676.1E-10535551IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005975Biological Processcarbohydrate metabolic process
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0004553Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compounds
Sequence ? help Back to Top
Protein Sequence    Length: 713 aa     Download sequence    Send to blast
MATFTFPLFL SLLLPLFAFA AAAGTVGINY GRIADNLPPP EKVVALFKSQ GINKVKLYDT  60
DAAVLTALAN SGIGVVVAIP NELLSSAASD PSFADKWVQS NISQYHPKTQ IEAIAVGNEV  120
FADPNNTTQF LVPAIKNIQS SLVKYNLSSI KLSSPFALSA LNSSYPPSAG AFKPDLIEPV  180
IKPFLEFLTQ TSSYLMINAY PFFAYESTSD KISLDYALFR TNPGNPDSGN GLKYYSLLDA  240
QIDAVFAAMS AVGYGDIKLV VTETGWPSNG DENEIGAGKA NAAAYNGNLV KRVLTGGGTP  300
LKPNDPLNVY LFALFNEDQK TGPTSERNYG LFYPDETKVY DIPLTVAGLS GAQSSPANES  360
KVQVPAASPS AGNTWCVANG KAGEEKLQAA LDYACGEGGA DCRSIQEGST CFNPNTLEAH  420
ASYAFNSFYQ KKARGTGTCD FGGAAYVVAQ PPTRFLAMRR GGGAATRPAA PPGPPPXXXX  480
XXXXXXXXXX XXPAAPPAEP TGSRPCIGKE VRYRGVRKRP WGRFAAEIRD PWKKTRVWLG  540
TFDSAEDAAR AYDAAARILR GPKAKTNFQI SCAYPSFYNN PTDPAIEAKL FGSGYGFQDH  600
PAVDPQRPAS SSLSSTVESF SGPRPPLQST TVAAELTRRK RQPRTPPVVP EDCHSDCDSS  660
SSVVEDDGDF VASSSFRKAP LPFDLNFPPL DVDGESGGGV DGQDLRCTAL CL*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ghs_A2e-712634213041,3-BETA-GLUCANASE
1ghs_B2e-712634213041,3-BETA-GLUCANASE
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr002083.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankGU7324290.0GU732429.1 Malus x domestica AP2 domain class transcription factor (AP2D5) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009348307.10.0PREDICTED: glucan endo-1,3-beta-glucosidase 7-like
TrEMBLA0A498IGT30.0A0A498IGT3_MALDO; Uncharacterized protein
STRINGXP_009348307.10.0(Pyrus x bretschneideri)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.12e-28ethylene responsive element binding factor 3