 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pbr001571.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
| Family |
HD-ZIP |
| Protein Properties |
Length: 305aa MW: 34738.7 Da PI: 5.3475 |
| Description |
HD-ZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pbr001571.1 | genome | CPETR | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | Homeobox | 59.8 | 4.4e-19 | 85 | 138 | 3 | 56 |
--SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
Homeobox 3 kRttftkeqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56
k++++++eq+++Le+ Fe ++++ e++ +LA++lgL+ rqV +WFqNrRa++k
Pbr001571.1 85 KKRRLNSEQVKALERNFEVENKLEPERKVKLAEELGLQPRQVAIWFQNRRARWK 138
456899***********************************************9 PP
|
| 2 | HD-ZIP_I/II | 128.5 | 2.9e-41 | 85 | 176 | 2 | 93 |
HD-ZIP_I/II 2 kkrrlskeqvklLEesFeeeekLeperKvelareLglqprqvavWFqnrRARtktkqlEkdyeaLkraydalkeenerLekeveeLreelke 93
kkrrl++eqvk+LE++Fe e+kLeperKv+la+eLglqprqva+WFqnrRAR+ktkqlE+dy+ Lk+ yd lk + ++Le+++++L+e+l++
Pbr001571.1 85 KKRRLNSEQVKALERNFEVENKLEPERKVKLAEELGLQPRQVAIWFQNRRARWKTKQLERDYSILKTDYDGLKLNFDSLERQNKALAEKLSQ 176
9**************************************************************************************99976 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 305 aa
Download sequence Send
to blast |
MKRFSXXXXX XXXXXXXXXX XXXXXXXXXX XXXFSSSDSL GALVSNFPSK EEGKLAKDSY 60
GYSKELQAML DSLNQEDVEE EMSGKKRRLN SEQVKALERN FEVENKLEPE RKVKLAEELG 120
LQPRQVAIWF QNRRARWKTK QLERDYSILK TDYDGLKLNF DSLERQNKAL AEKLSQLKAK 180
LYGESAQRND SVKEESPISM CKSSENLEVD LIKNLKSKDG SSDSDSNGVL MKEESNGNSS 240
LGFNNNRNSI SSNSMVNWFQ LSDSRSVGGK GFQAQTVRME EQSFFSTDES CNFFSVDQAP 300
SLHW*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 132 | 140 | RRARWKTKQ |
