PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr001363.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family ERF
Protein Properties Length: 321aa    MW: 35750.4 Da    PI: 4.8019
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr001363.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP258.91.2e-18176226255
          AP2   2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                  +y+GVr+++ +g+++AeIrdp +ng  +r++lg++ t eeAa a+++a+ +++g
  Pbr001363.1 176 HYRGVRQRP-WGKFAAEIRDPAKNG--ARVWLGTYETSEEAALAYDRAAFRIRG 226
                  7********.***********9987..*************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:3.30.730.101.5E-31175235IPR001471AP2/ERF domain
SMARTSM003802.6E-37176240IPR001471AP2/ERF domain
CDDcd000188.48E-33176235No hitNo description
PROSITE profilePS5103224.302176234IPR001471AP2/ERF domain
SuperFamilySSF541718.5E-23176236IPR016177DNA-binding domain
PfamPF008472.9E-14176226IPR001471AP2/ERF domain
PRINTSPR003671.9E-10177188IPR001471AP2/ERF domain
PRINTSPR003671.9E-10200216IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MGNISSPHVM PCLTEQWGNL PFQVDDSEDM IVYNSLRDAF SLGWSPDHTF PFQVDDWEDM  60
INYNSDAFSL GWSPDHTLEC IKPEQAYDLD HLFDQYHDQL PPDLFTQSQP HDFDVSINGN  120
KPSQPLVLPP DTDIPPLDHD DRDQNQVQVG DAVAEQEEVN VNVPKLQKSG VARGRHYRGV  180
RQRPWGKFAA EIRDPAKNGA RVWLGTYETS EEAALAYDRA AFRIRGSKAL LNFPHRIGLN  240
EPPPVRVTGK RKEPEQEAAA SSSTSSSSSS ATPTAAIKRS KLDKSVSSSA DHDDQANVCH  300
TRQKNNTSYM LPLGEQLLVS *
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2gcc_A2e-37172241170ATERF1
3gcc_A2e-37172241170ATERF1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr001363.1
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKC7700790.0KC770079.1 Pyrus pyrifolia microsatellite TXY215 sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009362713.10.0PREDICTED: ethylene-responsive transcription factor 1-like
TrEMBLA1ILM20.0A1ILM2_MALDO; Ethylene response factor
TrEMBLD9ZIM10.0D9ZIM1_MALDO; AP2D domain class transcription factor
STRINGXP_009362713.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF1691658
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G47220.17e-41ethylene responsive element binding factor 2