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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr001362.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
ERF |
Protein Properties |
Length: 323aa MW: 35727.8 Da PI: 7.3684 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr001362.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.8 | 1.5e-19 | 155 | 205 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp+++g r++lg+f+ta eAaka++ a+ kl+g
Pbr001362.1 155 HYRGVRRRP-WGKYAAEIRDPNKRG--SRVWLGTFDTAIEAAKAYDFAAFKLRG 205
7********.**********96655..*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 323 aa
Download sequence Send
to blast |
MASEDSSALE LIRQHLLNEF TTVDSFITSL NLCTSHIPQQ HEITQSPFNT TSSSSPSSSS 60 SSSTITTSTT NSGSESTDQY FKISDYLVPE IDRDTRFETK PQISHPKPPK HSTLSHRKPA 120 INVAIPSPPP LSSSSGDENQ NTSNTSTVIE AAARHYRGVR RRPWGKYAAE IRDPNKRGSR 180 VWLGTFDTAI EAAKAYDFAA FKLRGSKAIL NFPLEAGRSE ELSADHPLLV SRKRRRERST 240 ESHESSGEMI RNKEIKKEED VQDIKIPAQE RVSTAVCPLT PSSWTAVWDL SKENELGIFS 300 VPPLSPLSPH PNFMGYSQLM VT*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | GU732483 | 0.0 | GU732483.1 Malus x domestica AP2 domain class transcription factor (AP2D60) mRNA, complete cds. |