|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pbr001361.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
|
Family |
ERF |
Protein Properties |
Length: 235aa MW: 26587.6 Da PI: 5.7173 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr001361.1 | genome | CPETR | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 54.1 | 3.9e-17 | 132 | 182 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.krkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+++AeIrdp k +r++lg+f t +Aaka++ a+ kl+g
Pbr001361.1 132 HYRGVRRRP-WGKYAAEIRDP---ArKGTRVWLGTFETDVDAAKAYDCAAFKLRG 182
7********.**********8...4445**********99*************98 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 235 aa
Download sequence Send
to blast |
MSTHEEQDYS TLELIRQHLL EDFTFTDSFI SHLNFEITPD DISYFEFQPI KPEYSSLSES 60 GSSSPMSTPN YHSPQLSNSE TKPESVNLPS MEVESLNLSS QCSPKRKNST CQTSSSKDEL 120 QQVSGSGDVL RHYRGVRRRP WGKYAAEIRD PARKGTRVWL GTFETDVDAA KAYDCAAFKL 180 RGRKAILNFP LEAGLSEPPL NMARKRRRSV KQEEVTKTEE LELQSWVLWE GQGA*
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 203 | 207 | RKRRR |
2 | 203 | 208 | RKRRRS |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | GU732443 | 0.0 | GU732443.1 Malus x domestica AP2 domain class transcription factor (AP2D19) mRNA, complete cds. |