PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Pbr000646.1
Organism
Pyrus bretschneideri
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
Family EIL
Protein Properties Length: 605aa    MW: 67598.6 Da    PI: 5.6087
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Pbr000646.1genomeCPETRView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3435.93.7e-133374021345
                  XXXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
         EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaatgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpvegasdsLraWWkek 98 
                  e+l+ rmwkd+++lkrl+er+k   e+++a ++ +k +++++qarrkkmsraQDgiLkYMlk mevc+a+GfvYgiipekgkpv+gasd++raWWkek
  Pbr000646.1  37 EDLEMRMWKDRIKLKRLRERQKL--EAQQA-AEMQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNVRAWWKEK 131
                  89*************99999886..45665.9999*************************************************************** PP

                  XXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH---S--HHHHHHT--TT--.---- CS
         EIN3  99 vefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPtGkelwwgelglskdqgtppyk 196
                  v+fd+ngpaai+ky+a++l++s+++++  ++ +++++l++lqD+tlgSLLs+lmqhcdppqr++plekgv+pPWWPtG+e+ww +lg+++ q+ ppyk
  Pbr000646.1 132 VKFDKNGPAAIAKYEAECLAMSDADNN--RNGNSQSTLQDLQDATLGSLLSSLMQHCDPPQRKYPLEKGVPPPWWPTGNEDWWVKLGIAHGQS-PPYK 226
                  **********************99998..789999*********************************************************9.9*** PP

                  -GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX........XXXXXXXXXXXXXXXXXXXXX CS
         EIN3 197 kphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss........slrkqspkvtlsceqkedveg 286
                  kphdlkk+wkv+vLtavikhmsp+i++ir+++rqsk+lqdkm+akes+++l vl++ee+++++ s+++         ++ +++++  +s+++++dv+g
  Pbr000646.1 227 KPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREESLIRQPSSDNGtsgiiempQSGRGEKQAAASSNSDYDVDG 324
                  *******************************************************************444568877766779999************6 PP

                  XXXXX.XXXXXXXXXX.....................XXXXXXXXXXXXXXXXXXXXX......XXXXXXX.XXXXXXXX CS
         EIN3 287 kkeskikhvqavktta.....................gfpvvrkrkkkpsesakvsskevsrtcqssqfrgsetelifad 345
                  +++   + +++++  +                     + + + ++k +++++a v ++ v ++   s+ ++ +++  ++d
  Pbr000646.1 325 TDDGLGSVSSSKDD-MrnqvtdveplsklrnnsrnnvQDKEHGEKK-PRRKRARVRASPVEQLPAPSHNEHLHVRGALPD 402
                  66655442222222.2245667788888887776655333333333.344444444444555555555555555555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.0E-12637284No hitNo description
Gene3DG3DSA:1.10.3180.101.9E-72158292IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167681.57E-62165287IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 605 aa     Download sequence    Send to blast
MGDVGEIGPD ISSDIEEDLR CDNIAEKDVS DEEIESEDLE MRMWKDRIKL KRLRERQKLE  60
AQQAAEMQKP KQTSDQARRK KMSRAQDGIL KYMLKLMEVC KARGFVYGII PEKGKPVSGA  120
SDNVRAWWKE KVKFDKNGPA AIAKYEAECL AMSDADNNRN GNSQSTLQDL QDATLGSLLS  180
SLMQHCDPPQ RKYPLEKGVP PPWWPTGNED WWVKLGIAHG QSPPYKKPHD LKKMWKVGVL  240
TAVIKHMSPD IAKIRRHVRQ SKCLQDKMTA KESAIWLGVL SREESLIRQP SSDNGTSGII  300
EMPQSGRGEK QAAASSNSDY DVDGTDDGLG SVSSSKDDMR NQVTDVEPLS KLRNNSRNNV  360
QDKEHGEKKP RRKRARVRAS PVEQLPAPSH NEHLHVRGAL PDINHTDVQM IGYQVHENQQ  420
ENGGITTLRP LENDLDVQAQ IPAPEFNYYP GVPSENVIMT QGMHVGGTPL LYHGVQDADM  480
HHGDTFNQHH GDTFNLYNPS AQYPPSQDQQ LPQIVMNKPQ IIPTDGIHVP VHRNGSEIAG  540
GDPNFVQDTF QSEQDRTANA NFGSPIDSLS LDYGLFNSPF NFGIDGTGSL DDLELEEMME  600
YFAA*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wij_A2e-751642959140ETHYLENE-INSENSITIVE3-like 3 protein
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in the ethylene response pathway. {ECO:0000269|PubMed:9215635, ECO:0000269|PubMed:9851977}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00649PBMTransfer from LOC_Os09g31400Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapPbr000646.1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEF0310650.0EF031065.1 Prunus persica EIL1 mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009374861.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein
SwissprotO231160.0EIL3_ARATH; ETHYLENE INSENSITIVE 3-like 3 protein
TrEMBLA0A498KBW10.0A0A498KBW1_MALDO; Uncharacterized protein
STRINGXP_009374861.10.0(Pyrus x bretschneideri)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF32234200
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G73730.10.0ETHYLENE-INSENSITIVE3-like 3
Publications ? help Back to Top
  1. Frerigmann H,Gigolashvili T
    Update on the role of R2R3-MYBs in the regulation of glucosinolates upon sulfur deficiency.
    Front Plant Sci, 2014. 5: p. 626
    [PMID:25426131]
  2. Zheng ZL,Zhang B,Leustek T
    Transceptors at the boundary of nutrient transporters and receptors: a new role for Arabidopsis SULTR1;2 in sulfur sensing.
    Front Plant Sci, 2014. 5: p. 710
    [PMID:25566284]
  3. Panda SK,Sunkar R
    Nutrient- and other stress-responsive microRNAs in plants: Role for thiol-based redox signaling.
    Plant Signal Behav, 2015. 10(4): p. e1010916
    [PMID:25912823]
  4. Wawrzyńska A,Sirko A
    EIN3 interferes with the sulfur deficiency signaling in Arabidopsis thaliana through direct interaction with the SLIM1 transcription factor.
    Plant Sci., 2016. 253: p. 50-57
    [PMID:27968996]