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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pbr000315.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Maloideae; Maleae; Pyrus
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Family |
NAC |
Protein Properties |
Length: 375aa MW: 41593.5 Da PI: 7.9671 |
Description |
NAC family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pbr000315.1 | genome | CPETR | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NAM | 170.2 | 6.4e-53 | 15 | 142 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kg 97
lppGfrFhPtdeelvv+yLkkk+++ +l++ ++i+evd+yk++Pw+Lp+k++ +e+ewyfF++rd+ky++g r+nra++sgyWkatg+dk++l++ ++
Pbr000315.1 15 LPPGFRFHPTDEELVVHYLKKKAASIPLPV-TIIAEVDLYKFDPWELPSKATFGEQEWYFFTPRDRKYPNGARPNRAATSGYWKATGTDKPILTSiGN 111
79****************************.89***************8888999**************************************99899 PP
NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128
++vg+kk Lvfy g+ pkg kt+W+mheyrl
Pbr000315.1 112 HNVGVKKALVFYGGKPPKGIKTNWIMHEYRL 142
99***************************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 375 aa
Download sequence Send
to blast |
MESTDSSSGS PHPQLPPGFR FHPTDEELVV HYLKKKAASI PLPVTIIAEV DLYKFDPWEL 60 PSKATFGEQE WYFFTPRDRK YPNGARPNRA ATSGYWKATG TDKPILTSIG NHNVGVKKAL 120 VFYGGKPPKG IKTNWIMHEY RLINNTTTAN MSFSTTKPSD AANKKASLRL DDWVLCRVYK 180 KNNAQRPTMS MEGDHFLHKA EDSNSSMEEG MFLHPSILPT QKPPPFPPPL SSKLPTTNYT 240 ALLESDYHES FFEGILSSSD HQQGSHSHHH DHDHDQFGAI STSSSKTSIP LKRQLSSPFW 300 NDVGSIGSAA AATTTSSSKR FQADLNSENN SFVSLLNQMP QGTAPFYPNP ALLGSLGDEV 360 LRPQFQLPSM NWNS*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor of the NAC family. May be associated with anther development and pollen production (Probable). Required for normal seed development and morphology (PubMed:18849494). {ECO:0000269|PubMed:18849494, ECO:0000305|PubMed:21107887}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KF198124 | 0.0 | KF198124.1 Malus hupehensis NAC domain protein (NAC92) mRNA, complete cds. |