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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.J336200.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 199aa MW: 20899.9 Da PI: 10.6977 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.J336200.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 37.4 | 5.4e-12 | 103 | 163 | 2 | 62 |
XXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 2 kelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
ke r +r+ +NR++A+ R+RKka++ eLe k+k Le N +L +++++l++e +l++
Pavir.J336200.1.p 103 KEQNRLKRLLRNRVSAQQARERKKAYLTELEAKAKDLELRNAELEQRVSTLQNENNTLRQI 163
78899***************************************************99986 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 199 aa
Download sequence Send
to blast |
MAAQEQEQEK QQAKTSTTSS LPSSSERSSS SAPNNLREGG AESDEEIRRV PEMGGASASA 60 SSGAGADERP KEDGKQGQLV AAAGAQGQPP APGKKRGRTA GDKEQNRLKR LLRNRVSAQQ 120 ARERKKAYLT ELEAKAKDLE LRNAELEQRV STLQNENNTL RQILKNTTAH ASKRSGGGGA 180 GGGKGGDGGG KKHHFTKS*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 181 | 189 | GGKGGDGGG |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT035088 | 0.0 | BT035088.1 Zea mays full-length cDNA clone ZM_BFb0038J16 mRNA, complete cds. |