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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.J186300.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 242aa MW: 25477.6 Da PI: 8.3824 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.J186300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 22.2 | 3.1e-07 | 141 | 183 | 21 | 63 |
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 21 RqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
R RKk ++ e ++ v +L+aeN++L++e+ l+ +++l +e+
Pavir.J186300.1.p 141 RPRKKLRLPEVQQLVRSLTAENDSLREEMRALQRACKALSKEN 183
99*************************************9987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 242 aa
Download sequence Send
to blast |
MAAAACADAD ADALAADIIC SLRGADLAGW TPPWCKPAPC EGELIWPPVA RGKRSRRRSP 60 SAGPAAAGKG RWGRGSPASP LDYSGGSGSG GSTSGGDDGG GFCSPGHRLA PATKVGSIGR 120 PQLPFPTPTF PTQPTRATGQ RPRKKLRLPE VQQLVRSLTA ENDSLREEMR ALQRACKALS 180 KENDKLETRL VQSDLPNEIT SKDQKGKEHI DEQVMQSTPD SFVLPDLNLP PQDTADVSPV 240 H*
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