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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.J160900.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
C2H2 |
| Protein Properties |
Length: 356aa MW: 38521.1 Da PI: 9.8366 |
| Description |
C2H2 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.J160900.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-C2H2 | 14.3 | 0.00012 | 128 | 145 | 3 | 20 |
ETTTTEEESSHHHHHHHH CS
zf-C2H2 3 CpdCgksFsrksnLkrHi 20
C Cg++F+ ++ L rH
Pavir.J160900.1.p 128 CRVCGRRFRARDALLRHF 145
*****************6 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MWPITIRAAA EVSTTPTPPR CDSLPMFPPL SHLRRRVLAA APELPAPLFF LFLSTAAAPA 60
ACKPTTAVAV LWDLAASRPP ITLPLYDAAV RLHLAATSFG RLRLSAAFVH PTHRLPAPAV 120
PAATTHLCRV CGRRFRARDA LLRHFDAIHA REHAKCLARI DSSRGDRRVR LAAALSLKLS 180
KYEKAARELT AGADAAATPA DELGRAGIRV ALTRTPAASL RERAQQVLDE GSVGCLMLVS 240
GKDDLASLLR VARERGVRSV VVGGESGLAR WADVWFRWPD VISGKARSAA PSVSGKWRDR 300
DVLKGLEWRY EEADDDEAVV FEDSDGDGVE ELARRAKGKP WWKLDSDDSD SNVGG*
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