|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.9NG799200.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
Family |
ERF |
Protein Properties |
Length: 309aa MW: 33033.1 Da PI: 4.4258 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9NG799200.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 49 | 1.5e-15 | 91 | 138 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+ykGVr+++ +g+W+AeIrdp+ + r++lg+f + Aa a++aa++ ++g
Pavir.9NG799200.1.p 91 QYKGVRRRP-WGKWAAEIRDPV----KgVRVWLGTFSS--AAALAYDAAARDIRG 138
69*******.**********75....44**********..9*********99998 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 309 aa
Download sequence Send
to blast |
MCGGAILAEL IPSTPARRVT PGHLWPAATQ QRADDFEAAF REFDGDSDEE VQSNPLGFNA 60 SSAGAATRKL RRQQEELLAA PAPSRRRKAA QYKGVRRRPW GKWAAEIRDP VKGVRVWLGT 120 FSSAAALAYD AAARDIRGPR AKLNFPSPTD AAPAAGRKRA RAAEFVDLVA DEEDDQQRCA 180 ASGVKHESET SESGGALPDF SWQGVSAYDE APAPVAVEAE DQSGASKRPR TEPESTDEAS 240 PRASDSESDA LFDAFLFGDQ LAYFNGGAYE SLDSLFSADA VQSNAAADEG MGLWSFDDGC 300 LVEDHLSF*
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 85 | 97 | RRKAAQYKGVRRR |
2 | 155 | 161 | GRKRARA |
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | BT068551 | 2e-65 | BT068551.1 Zea mays full-length cDNA clone ZM_BFb0310P02 mRNA, complete cds. |
GenBank | EU955715 | 2e-65 | EU955715.1 Zea mays clone 1543173 ethylene-responsive element binding protein 2 mRNA, complete cds. |
GenBank | EU955981 | 2e-65 | EU955981.1 Zea mays clone 1554709 ethylene-responsive element binding protein 2 mRNA, complete cds. |