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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.9NG771000.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 344aa MW: 37038.1 Da PI: 5.9418 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9NG771000.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31 | 5.6e-10 | 192 | 244 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
kr +r NR +A rs +RK +i+eLe+kv+ L++e ++L +l l+ +a
Pavir.9NG771000.2.p 192 KRVKRVLANRQSAARSKERKMRYIAELEQKVQILQTEATTLSAQLALLQRDSA 244
999****************************************9999987766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MEVDAAAARK AHHRRSRSDV PFGYFPPASG GAQLPPPKVE AGWGHHPGGD ADDLFNAYLN 60 LDGLNSSDER HDDGDSRGSS IKTNGADSSE NESEECAADS RAGIRLWGAE GLKRSAAGEP 120 AGAPMARHAR SLSMDSLIGK LNFSAGAAAN GAVIAGPNRF SLEFGSGEFS PVEMKKIMAD 180 EKLAEMALAD PKRVKRVLAN RQSAARSKER KMRYIAELEQ KVQILQTEAT TLSAQLALLQ 240 RDSAGIATQN NELKFRLQAM EQQAQLRDAL NEALTAEVQR LKIATAELGD SCSSNNLAQQ 300 LQLSAQDQMF QLQHQQQQAT PIPFYQLQQA QQNGAGKNQD STE*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU971509 | 0.0 | EU971509.1 Zea mays clone 366380 DNA binding protein mRNA, complete cds. |