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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.9NG610300.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 331aa MW: 36806.7 Da PI: 9.4112 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9NG610300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 28.3 | 3.8e-09 | 45 | 87 | 4 | 46 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
k+ rr+++NReAAr+sR+RKka +++Le +L + ++L+
Pavir.9NG610300.1.p 45 QKVLRRLAQNREAARKSRLRKKAFVQQLESSKLKLASLEQELQ 87
5899*************************86666666555554 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 331 aa
Download sequence Send
to blast |
MADASSRTDT STVVDTDDMN QRSGAIVMAS NSSDRSDRSD KPMDQKVLRR LAQNREAARK 60 SRLRKKAFVQ QLESSKLKLA SLEQELQKAR QQGIFISSSG DQTHAMSGNG AMTFDLEYSR 120 WQEEQNKQIN ELRTAVNAHA SDSDLRLIAD GIMAHYDEIF RLKGVAAKAD VFHILSGMWK 180 TPAERCFLWL GGFRSSELLK LLVNQLEPLT EQQLMGLSNL QQSSQQAEDA LSQGMEALQQ 240 SLAETLAGSL GPSGSSGNVA NYMGQMAMAM GKLGTLENFL RQADNLRQQT LHQMQRILTI 300 RQAARALLAI HDYFSRLRAL SSLWLARPRE *
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT066852 | 0.0 | BT066852.1 Zea mays full-length cDNA clone ZM_BFb0077I20 mRNA, complete cds. |