 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pavir.9NG603600.1.p |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
EIL |
| Protein Properties |
Length: 645aa MW: 71728.3 Da PI: 4.8278 |
| Description |
EIL family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.9NG603600.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | EIN3 | 510.2 | 9.7e-156 | 78 | 467 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaa.....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpve 85
eel++rmw+d+m+lkrl+e ++ + +d+ a g++k ++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+
Pavir.9NG603600.1.p 78 EELERRMWRDRMKLKRLRELQQTRGKDQAAGgggggDGSSKPRQSQEQARRKKMSRAQDGILKYMLKMMEVCRAQGFVYGIIPEKGKPVS 167
8********************9999888777999888899999*********************************************** PP
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH--- CS
EIN3 86 gasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPt 175
gasd+LraWWkekv+fdrngpaai+kyqa+n++++ e++l + + +++hsl+elqDTtlgSLLsalmqhcdppqrr+plekgv+pPWWPt
Pavir.9NG603600.1.p 168 GASDNLRAWWKEKVRFDRNGPAAIAKYQADNAVPGAENELAS-GAASPHSLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVPPPWWPT 256
****************************************66.*********************************************** PP
S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX CS
EIN3 176 GkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss 265
G+e+ww+elg++kdqg+ppykkphdlkkawkvsvLtavikhmsp+ie+ir+l+rqsk+lqdkm+ake ++l+v++qee+++ ++++ +
Pavir.9NG603600.1.p 257 GDEEWWPELGIPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMTAKEISTWLAVVKQEEELYLKLHPGAR 346
***************************************************************************************944 PP
...XXXX..XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX............................XXXXXXXXXXXXXXXXXXXX CS
EIN3 266 ...slrk..qspkvtlsceqkedvegkkeskikhvqavktta............................gfpvvrkrkkkpsesakvss 322
s ++ ++++s++ ++dv+ +e k ++ ++k++ ++++++kr+++ + + +
Pavir.9NG603600.1.p 347 ppaSAGGiaSAISFNASSS-EYDVDIVDECKGDEAGNQKAAVtdptafnlgaamlsdkflmptpmkeetaDVEFIQKRNAPAAAEPELML 435
3442222425555555555.99***7777777877777776688999********************************98766555555 PP
X......XXXXXXX.XXXXXXXXXXXXXXXXX CS
EIN3 323 kevsrtcqssqfrgsetelifadknsisqney 354
++ ++tc++ q+++s+++ +f d+n++++++y
Pavir.9NG603600.1.p 436 NNRVYTCNNVQCPHSDYSYGFLDRNARNSHQY 467
5567**************************98 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0001666 | Biological Process | response to hypoxia |
| GO:0009873 | Biological Process | ethylene-activated signaling pathway |
| GO:0042742 | Biological Process | defense response to bacterium |
| GO:0071281 | Biological Process | cellular response to iron ion |
| GO:0005634 | Cellular Component | nucleus |
| GO:0000976 | Molecular Function | transcription regulatory region sequence-specific DNA binding |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 645 aa
Download sequence Send
to blast |
MMGGGMMMDQ GMVFPGVHNF VDLLQQNGDK NLGFGSLMPQ TSSGDQCVMG EGDLVDPPPE 60
SFPDAGEDDS DDDVEDIEEL ERRMWRDRMK LKRLRELQQT RGKDQAAGGG GGGDGSSKPR 120
QSQEQARRKK MSRAQDGILK YMLKMMEVCR AQGFVYGIIP EKGKPVSGAS DNLRAWWKEK 180
VRFDRNGPAA IAKYQADNAV PGAENELASG AASPHSLQEL QDTTLGSLLS ALMQHCDPPQ 240
RRYPLEKGVP PPWWPTGDEE WWPELGIPKD QGPPPYKKPH DLKKAWKVSV LTAVIKHMSP 300
DIEKIRRLVR QSKCLQDKMT AKEISTWLAV VKQEEELYLK LHPGARPPAS AGGIASAISF 360
NASSSEYDVD IVDECKGDEA GNQKAAVTDP TAFNLGAAML SDKFLMPTPM KEETADVEFI 420
QKRNAPAAAE PELMLNNRVY TCNNVQCPHS DYSYGFLDRN ARNSHQYTCK YNDPLPQNSE 480
NKPPPPQSQT FQGSFNQPNQ ALNNLDFSLP MDGQRSIAEL MNMYDNNFMT NKSMSSDSVS 540
IMERPNALPP RMQMDDGFFG QGNGVFDDVN SMMQQPQQAP GQQQQQQQPE QQQFFIRDDT 600
PYGSQMADIT GTSEFRFGSG FNMSSNVDYP GAARQKNDGP NWYY*
|
| Expression --
Description ? help
Back to Top |
| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, leaf blades, leaf sheaths, stems, internodes, anthers of young flowers, and developing grains. {ECO:0000269|PubMed:25995326}. |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor acting as a positive regulator in the ethylene response pathway (PubMed:16786297, PubMed:28829777, PubMed:27701783, PubMed:25995326). Required for the inhibition of root growth by ethylene in etiolated seedlings (PubMed:25995326, PubMed:28829777). Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression (PubMed:28829777). Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae) (PubMed:27701783). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal infection (PubMed:27701783). May enhance disease resistance by facilitating reactive oxygen species (ROS) generation and jasmonate biosynthesis with subsequent phytoalexin accumulation during Magnaporthe oryzae infection (PubMed:27701783). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:16786297, ECO:0000269|PubMed:25995326, ECO:0000269|PubMed:27701783, ECO:0000269|PubMed:28829777, ECO:0000269|PubMed:30002253}. |
| Regulation -- Description ? help
Back to Top |
| Source |
Description |
| UniProt | INDUCTION: Induced by infection with the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:27701783}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | EU973374 | 0.0 | EU973374.1 Zea mays clone 397696 ETHYLENE-INSENSITIVE3-like 1 protein mRNA, complete cds. |
| GenBank | KT156845 | 0.0 | KT156845.1 Zea mays subsp. mays transcription factor EIL1 mRNA, complete cds. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Yang C, et al.
MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
Plant Physiol., 2015. 169(1): p. 148-65
[PMID:25995326] - Yang C, et al.
Activation of ethylene signaling pathways enhances disease resistance by regulating ROS and phytoalexin production in rice.
Plant J., 2017. 89(2): p. 338-353
[PMID:27701783] - Qin H, et al.
The activation of OsEIL1 on YUC8 transcription and auxin biosynthesis is required for ethylene-inhibited root elongation in rice early seedling development.
PLoS Genet., 2017. 13(8): p. e1006955
[PMID:28829777] - Kuroha T, et al.
Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
Science, 2018. 361(6398): p. 181-186
[PMID:30002253]
|
