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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.9NG493500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 410aa MW: 44027 Da PI: 7.4539 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9NG493500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 30.4 | 8.3e-10 | 243 | 301 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
kr +r NR +A rs +R+ +i+eLe+kv+ L++e ++L +l l+ +a l +++
Pavir.9NG493500.1.p 243 KRVKRVLANRQSAARSKERRMRYIAELEQKVQILQTEATTLSAQLTLLQRDSAGLATQN 301
999*********************************************99998887766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 410 aa
Download sequence Send
to blast |
MNTANGNGLA HHHHVQAPPM PPPPAHQKQR PGLPPTPPPS APGSHSLHHA GACVDDSSAA 60 QAQAQGGLPP RRAHRRSCSD VAFGYFQPLP PPSPTPKVES GGWGLPGGAA GDDLFNAYMS 120 MEGMDGLNNN SDGDSRGSSG MRTNGADSSE NESEDYGGGG QFLLWGDAGK KKRNAAGEPA 180 PPPPARHARS LSMDSLMGKL SFSANGEPGR FSLEFGGGEF TPAEMKRIMA DEKLAEMALA 240 DPKRVKRVLA NRQSAARSKE RRMRYIAELE QKVQILQTEA TTLSAQLTLL QRDSAGLATQ 300 NNELKFRLQA MEQQAQLRDA LNEALSTEVQ RLKLGATSSS GGMPQQMQQL RCQNQMVELH 360 KQQGEQIPFY QLEHREQNGA PRNHDPKGRN EDGSEGHAST CAELYGKNV*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT035229 | 0.0 | BT035229.1 Zea mays full-length cDNA clone ZM_BFb0046N14 mRNA, complete cds. |
GenBank | JX469926 | 0.0 | JX469926.1 Zea mays subsp. mays clone UT3184 bZIP-type transcription factor mRNA, partial cds. |