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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.9NG400000.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 205aa MW: 21424.1 Da PI: 8.2206 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9NG400000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 57.9 | 2.1e-18 | 133 | 185 | 3 | 55 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkke 55
+++r +r++kNRe+A rsR+RK+a++ eLe++vk L++eN++L+ + e+l+
Pavir.9NG400000.1.p 133 SDRRKKRMIKNRESAARSRARKQAYVRELEQEVKLLQQENESLRVKYEQLRVS 185
689******************************************99999765 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:2000028 | Biological Process | regulation of photoperiodism, flowering |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
Protein Sequence Length: 205 aa
Download sequence Send
to blast |
MAAAMDLEDD EDFWGNTASS PSASPPGSLA AAAVSPCGAF ISTQLSLNSR LHLLSTAGGS 60 SALGAGIYAA DDGRHHMDLG GGFRNAAASP APFFSAYNPA AGAGTARSVL EDEMCLGPDA 120 AAATWAGAGV GGSDRRKKRM IKNRESAARS RARKQAYVRE LEQEVKLLQQ ENESLRVKYE 180 QLRVSVEVAV PVKKTLQRMP SAPF*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EF093789 | 2e-71 | EF093789.1 Zea mays delayed flowering1 (DLF1) mRNA, complete cds. |