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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.9NG280500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 241aa MW: 25502.1 Da PI: 10.7696 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9NG280500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.3 | 5e-20 | 80 | 129 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr..krfslgkfgtaeeAakaaiaarkkleg 55
+++GVr+++ +grW+AeIrdp + +r +lg+f taeeAa+a++aa +l+g
Pavir.9NG280500.1.p 80 HFRGVRRRP-WGRWAAEIRDP-----HsrRRLWLGTFNTAEEAAAAYDAANIRLRG 129
69*******.**********7.....335*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 241 aa
Download sequence Send
to blast |
MGPNPSLQQL VAVAAVKASE PPPPPRARVV RILVHDADAT DSSSSEDEAP PPPRRARGGS 60 SSVGAKRRVM EAAGANSPVH FRGVRRRPWG RWAAEIRDPH SRRRLWLGTF NTAEEAAAAY 120 DAANIRLRGA SAPTNFPSAR YSLPPEPAKP IISLTPEPGK VITLPPVPVK PTVPLQVKKE 180 GGSYYGQVEG GSSELNAFAP KPLWEMIPGK RKKRPGCGNG SCLRIAIHAA SVCVEEVGGA 240 *
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Functional Description ? help
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Source |
Description |
UniProt | Component of the cytokinin signaling pathway involved in cotyledons, leaves, and embryos development. Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250, ECO:0000269|PubMed:16832061}. |