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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.9NG189800.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
MYB |
Protein Properties |
Length: 335aa MW: 36323.6 Da PI: 6.7281 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9NG189800.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 34.6 | 4.5e-11 | 2 | 33 | 16 | 48 |
HHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 16 vkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
v+++G + W++I+r+++ gR +kqc++rw ++l
Pavir.9NG189800.2.p 2 VEMYGDRKWAAISRHLP-GRIGKQCRERWTNHL 33
99***************.************996 PP
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2 | Myb_DNA-binding | 52.1 | 1.5e-16 | 43 | 83 | 3 | 45 |
SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
WT+e+d l++a+k +G++ W++Iar++ gR+++++k++w+
Pavir.9NG189800.2.p 43 IWTEEDDMNLIEAHKVYGNR-WSLIARKLE-GRSENSVKNHWN 83
6*******************.*********.***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MVEMYGDRKW AAISRHLPGR IGKQCRERWT NHLRPEIDKA KNIWTEEDDM NLIEAHKVYG 60 NRWSLIARKL EGRSENSVKN HWNATKRSLK AKRRLKKKKN AEAPPGQQWS ILEEYIRSLR 120 PDELAAAPPA PSDDSPPSSY NNVGYGGEVV SPPAAPAPAG GGFDPAAMRL YLSAAAAGSS 180 SSAVNNLAAM NRNPNMAAQP YLGLDLNAYY YGAPLQQQTP PPTPMMMTMM GQDQHQAAAS 240 YSADNLMMTY PFVDHLQAWH SPAPNADAYA ATNANAGPHY SYYSDAGAGP SAAAAAAPAP 300 ANPQDDVDVV QMASREFQLN PSDEEVTLNL AGFV*
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