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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.9NG137100.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
Nin-like |
| Protein Properties |
Length: 285aa MW: 29917.6 Da PI: 8.1019 |
| Description |
Nin-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.9NG137100.1.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | RWP-RK | 73.1 | 3.6e-23 | 22 | 68 | 4 | 50 |
RWP-RK 4 eisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkik 50
++s e++sk Fslpi++AA+ Lgvc++vLKriCR yGI RWP+Rk+
Pavir.9NG137100.1.p 22 SLSYEEISKLFSLPIAEAASILGVCTSVLKRICRSYGIVRWPYRKLV 68
6899*****************************************96 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 285 aa
Download sequence Send
to blast |
MASSAPAPQP QPQPLPKPTR VSLSYEEISK LFSLPIAEAA SILGVCTSVL KRICRSYGIV 60
RWPYRKLVSG KAGDDTKGPE REKAKELLEL SKIAKQKAFS PSGSPVVSTS TSQGAAKSQQ 120
GSSKAGQLSV SPPAVKQNAS ASLAHGSQAK AIPSYMDGFK YGFPSSGLSC ETMKWWGGSS 180
DSDCAPTKDG SCEAHGEASK GMTDDDELDW GADEAEAEAD GAVTAEASAQ LCSLRRKAVD 240
DGRKLLNGDT SRGQDFSRLN KRQKLALAQV FGASLPDVVL VFSE*
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