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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.9NG120800.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
GRF |
Protein Properties |
Length: 591aa MW: 61498.5 Da PI: 6.873 |
Description |
GRF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9NG120800.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | WRC | 74.8 | 9.2e-24 | 212 | 255 | 2 | 45 |
WRC 2 aepgrCrRtDGKkWRCsrrvlegkklCErHlhrgrsrsrkskee 45
epgrCrRtDGKkWRCsr++++++k+CErH++rgr+rsrk++e
Pavir.9NG120800.1.p 212 LEPGRCRRTDGKKWRCSRDAVADQKYCERHMNRGRHRSRKHVEG 255
69***************************************986 PP
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2 | QLQ | 58.6 | 1.9e-20 | 144 | 179 | 1 | 36 |
QLQ 1 saFTaaQlqlLksQilAyKyLaanqPvPpeLlqaiq 36
++FT++Q+ +L++Q+l+yKyLaan P+Pp Ll++i+
Pavir.9NG120800.1.p 144 GPFTPSQWIELEHQALIYKYLAANSPIPPSLLVPIR 179
59*********************************7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 591 aa
Download sequence Send
to blast |
MELGGVVMDA GGGAAELGLL VGGSSRLLKH GRGNAAAGGE EHGWGGRAAK QARTAADAAE 60 AAKAAVAPFL LGSCSPGHGG EQMLSFSSAA ASSCASTAAV AAAAAAVAAD GAMPLYYGTP 120 ASCSGLSSVS LSSSMQGAMA RVRGPFTPSQ WIELEHQALI YKYLAANSPI PPSLLVPIRS 180 SIASSPYPPS YFGTSALGWG SFQLGYSGNA DLEPGRCRRT DGKKWRCSRD AVADQKYCER 240 HMNRGRHRSR KHVEGQPGHA AKAMSAAVAA AAATQPTALA ASGAGATAAG LTVSQHQQPV 300 KSYAAGATDP CSLQYNRELV NKQNENDNMQ DSDNLSMLTS MNTRNPGSLF PFSKQNNPFE 360 VTSSRPEFGL VSSDSLMSSP HSSLENVNVL SSQSLNENQS SASLQHFVDW PRTPAQGGLS 420 WADAEDMQAQ RSQLSISAPM ASSELSSAST SPIQEKLMLS PLKLSREYSP IGLSIAASRD 480 EVSQLEANWA TMFRDSSMGG PLGEVLTKNS NAEARHCLPA PLNLLTDCWD SSPGMESSPV 540 GVLQKTTFGS VSSSTGSSPR MENHGAYDGI SNLRDDLGSI VVNHPSIRLM *
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Functional Description ? help
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Source |
Description |
UniProt | Transcription activator that plays a regulatory role in gibberellin-induced stem elongation. {ECO:0000250}. |