|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.9NG087500.1.p |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
Family |
ERF |
Protein Properties |
Length: 294aa MW: 31953.3 Da PI: 8.3809 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9NG087500.1.p | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 44.3 | 4.3e-14 | 22 | 69 | 2 | 53 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkl 53
+y+ Vr ++ +gr+ AeIrdp + r+r++lg+f++ae+Aa+a+ a+++l
Pavir.9NG087500.1.p 22 RYRAVRKRP-WGRFTAEIRDPAK---RARIWLGTFDSAEDAARAYNVAARAL 69
6999*****.**********843...6*******************999875 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 294 aa
Download sequence Send
to blast |
MTDVNVFGFH LLLSWSAAAA QRYRAVRKRP WGRFTAEIRD PAKRARIWLG TFDSAEDAAR 60 AYNVAARALP TTSPHSPPAL PTPPAANPRP HAAPAPPSSP PAGRFGIAHN SLMSCSNLDS 120 SIVFAPADGT RGGILTAWDP TVFTLSDYFI KPHSLTTCFS CNLSNLDFAI TNTYGPSDHS 180 ASIPFLQCLE ELPALIPGPW ILLGDFNLLR CAADKNNGQF NHSLATAFND AIQDLNVSEI 240 VLSDRLYTWT NLQLNPILAK LDRVFTPRPC LPSSNPLLSP SPHFRSYTLA SKF*
|
Annotation --
Nucleotide ? help
Back to Top |
Source |
Hit ID |
E-value |
Description |
GenBank | EU958014 | 8e-59 | EU958014.1 Zea mays clone 1640422 ethylene-responsive transcription factor 3 mRNA, complete cds. |