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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.9NG076500.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
GRAS |
Protein Properties |
Length: 197aa MW: 21566.7 Da PI: 9.2281 |
Description |
GRAS family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9NG076500.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | GRAS | 73.4 | 4.1e-23 | 104 | 195 | 272 | 363 |
GRAS 272 eaklpreseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlg 361
e+kl+++s er+ vEr++lg+e+ +v+ ega+rrerh +l++W r+e aGF++vpls+ a q lr++++ g + e+ g+lvl+
Pavir.9NG076500.1.p 104 ESKLGSDSAERAEVERAVLGEEVWDVLLREGARRRERHDRLQQWAPRMEVAGFRSVPLSYVALRQGINTLRRCGMGGCESREHGGCLVLC 193
678999************************************************************************************ PP
GRAS 362 Wk 363
W+
Pavir.9NG076500.1.p 194 WR 195
*7 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 197 aa
Download sequence Send
to blast |
MPNPSIRYPS DSGGSTTPSP SPPPSCAPLP LRRPLLRAPP QLTPPPSSPP LREAPPAPPP 60 AARPCHPIPC ALRPHSSPRW KPRAPDPTAP PEELHVEELG RRPESKLGSD SAERAEVERA 120 VLGEEVWDVL LREGARRRER HDRLQQWAPR MEVAGFRSVP LSYVALRQGI NTLRRCGMGG 180 CESREHGGCL VLCWRS*
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