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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.9KG548400.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 424aa MW: 45391.6 Da PI: 6.6105 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9KG548400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 31.5 | 3.8e-10 | 271 | 323 | 5 | 57 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
kr +r NR +A rs +RK +i+eLe+kv+ L++e ++L +l l+ +a
Pavir.9KG548400.1.p 271 KRVKRVLANRQSAARSKERKMRYIAELEQKVQILQTEATTLSAQLTLLQRDSA 323
999*****************************************999987766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 424 aa
Download sequence Send
to blast |
MNGVGDAHAA AMMQQQQHVQ ARVQQQHLGV SLPMATSFAP EQASAKPRPP GLPPTPPPAF 60 GGQRPSPGDS CTKVDAAAAR KAHHRRSRSD VPFGYFPPAS GGVQVQLPPP KVEVAWGHHP 120 GGGDADDLFN AYLNLEGLDG LNSSDERHDD GDSRGSSMKT NGADSSENES EECAADSRAA 180 GIRLWGGGEG LKRTAAGEPA GAPTARHARS LSMDSLIGKL NFSAGAMPSG GVMPGPNRFS 240 LEFGSGEFTP VEMKKIMADE KLAEMALADP KRVKRVLANR QSAARSKERK MRYIAELEQK 300 VQILQTEATT LSAQLTLLQR DSAGIATQNN ELKFRLQAME QQAQLRDALN EALTAEVQRL 360 KIATAELGDS CSSNNLAQQL QLSAQDQMFQ LQQQQQQQVT PIPFYQLQQA QQNGAGKNQD 420 STE*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU971509 | 0.0 | EU971509.1 Zea mays clone 366380 DNA binding protein mRNA, complete cds. |