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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.9KG306700.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 478aa MW: 51462.4 Da PI: 9.8897 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9KG306700.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 29.8 | 1.3e-09 | 332 | 390 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63
kr +r NR +A rs +R+ +i+eLe+kv+ L++e ++L +l l+ +a l +++
Pavir.9KG306700.1.p 332 KRVKRVLANRQSAARSKERRMRYIAELEQKVQILQTEATTLSAQLTLLQRDSAGLATQN 390
999*********************************************99998887766 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 478 aa
Download sequence Send
to blast |
MMLRLPAPGG FPERHGGASE LNPHATLPKG SPSVFPSSAR RPAIKYHPSN RVQAPRDTNP 60 DRAAPPQPPH PHEPPRSPHG RVGGGRHSPQ ASMSTANGNG LAAHHHHVQA PMPPPPPLHQ 120 KQRPGLPPTP PPSAPGSHSL HHAGACVDDG SSAQTRRAHR RSRSDVAFGY FQPLPPPSPT 180 PKAEAGGWGL AGGAAAGEDL LNAYMSMESM DGLNNNSDGD SRGSSGMRTN GADSSENESE 240 DYGGGGGDSQ FLLWADAGRK KRNAAGEPAL PPPARHARSL SMDSLMGKLS FSANGEPGRF 300 SLEFGGGEFT PAEMKRIMAD EKLAEMALAD PKRVKRVLAN RQSAARSKER RMRYIAELEQ 360 KVQILQTEAT TLSAQLTLLQ RDSAGLATQN NELKFRLQAM EQQAQLRDAL NEALTTEVQR 420 LKLGDTSSSS GNMPQQMPQL RCQNQMVELH RQQGEQIPFY QLEQREQNGA PRNHDPK*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT035229 | 0.0 | BT035229.1 Zea mays full-length cDNA clone ZM_BFb0046N14 mRNA, complete cds. |
GenBank | JX469926 | 0.0 | JX469926.1 Zea mays subsp. mays clone UT3184 bZIP-type transcription factor mRNA, partial cds. |