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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.9KG089900.1.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
EIL |
| Protein Properties |
Length: 648aa MW: 71784.5 Da PI: 4.746 |
| Description |
EIL family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.9KG089900.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | EIN3 | 507 | 9.2e-155 | 78 | 467 | 1 | 354 |
XXXXXXXXXXXXXXXXXXXXXXX..XXXXX......XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 1 eelkkrmwkdqmllkrlkerkkqlledkeaa.....tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpve 85
eel++rmw+d+m+lkrl+e ++ + +d+ aa g++k ++s+eqarrkkmsraQDgiLkYMlk+mevc+aqGfvYgiipekgkpv+
Pavir.9KG089900.1.p 78 EELERRMWRDRMKLKRLRELQQTRGKDQAAAgggggDGSSKPRQSQEQARRKKMSRAQDGILKYMLKMMEVCRAQGFVYGIIPEKGKPVS 167
8**********************9999999999988889999************************************************ PP
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH--- CS
EIN3 86 gasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWWPt 175
gasd+LraWWkekv+fdrngpaai+kyqa+n++++ e++l + + +++hsl+elqDTtlgSLLsalmqhcdppqrr+plekgv+pPWWPt
Pavir.9KG089900.1.p 168 GASDNLRAWWKEKVRFDRNGPAAIAKYQADNAVPGAENELAS-GAASPHSLQELQDTTLGSLLSALMQHCDPPQRRYPLEKGVPPPWWPT 256
****************************************66.*********************************************** PP
S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XXXXXX CS
EIN3 176 GkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvsahss 265
G+e+ww+elg++kdq +ppykkphdlkkawkvsvLtavikhmsp+ie+ir+l+rqsk+lqdkm+ake ++l+v++qee+++ ++++ +
Pavir.9KG089900.1.p 257 GDEEWWPELGIPKDQVPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMTAKEISTWLAVVKQEEELYLKLQPGAR 346
***************************************************************************************944 PP
.....XXXX..XXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX............................XXXXXXXXXXXXXXXXXX CS
EIN3 266 .....slrk..qspkvtlsceqkedvegkkeskikhvqavktta............................gfpvvrkrkkkpsesakv 320
++ ++++s++ ++dv+ +e k ++ +k + ++++++kr+++ + +
Pavir.9KG089900.1.p 347 ppasaG--GiaSAISFNASSS-EYDVDIADECKGDEAGDQKSAVadptafnlgaamlsdkflmpppmkeetaEVEFIQKRNAPAAAEPEL 433
344322..2325555555555.99***888888777777776557888999******************************987665555 PP
XXX......XXXXXXX.XXXXXXXXXXXXXXXXX CS
EIN3 321 sskevsrtcqssqfrgsetelifadknsisqney 354
+ ++ ++tc++ q+++s+++ +f d+n++++++y
Pavir.9KG089900.1.p 434 MLNNRVYTCNNVQCPHSDYSYGFLDRNARNSHQY 467
555567**************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 648 aa
Download sequence Send
to blast |
MMGGGLMMDQ GMVFPGVHNF VDLLQQNGDK NLGFGSLMPQ TSSGDQCVMG EGDLVDPPPE 60
SFPDAGEDDS DDDVEDIEEL ERRMWRDRMK LKRLRELQQT RGKDQAAAGG GGGDGSSKPR 120
QSQEQARRKK MSRAQDGILK YMLKMMEVCR AQGFVYGIIP EKGKPVSGAS DNLRAWWKEK 180
VRFDRNGPAA IAKYQADNAV PGAENELASG AASPHSLQEL QDTTLGSLLS ALMQHCDPPQ 240
RRYPLEKGVP PPWWPTGDEE WWPELGIPKD QVPPPYKKPH DLKKAWKVSV LTAVIKHMSP 300
DIEKIRRLVR QSKCLQDKMT AKEISTWLAV VKQEEELYLK LQPGARPPAS AGGIASAISF 360
NASSSEYDVD IADECKGDEA GDQKSAVADP TAFNLGAAML SDKFLMPPPM KEETAEVEFI 420
QKRNAPAAAE PELMLNNRVY TCNNVQCPHS DYSYGFLDRN ARNSHQYTCK YNDPLPQSSE 480
NKPPPPPPPP QSQAFQGSFS QPNQALNNLD FSLPMDGQRS IAELMNMYDN NFMANKSMSS 540
DSVSIMERPN ALPPRMQMDD GFFGQGNGVF DDVNSMMQQP QQAPVQQQQQ QPAQQQFFIR 600
DDAPYGSQMG DITGTSEFRF GSGFNMSSNV DYPGAAQQKN DGPNWYY*
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| Expression --
Description ? help
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| Source |
Description |
| Uniprot | TISSUE SPECIFICITY: Expressed in roots, leaf blades, leaf sheaths, stems, internodes, anthers of young flowers, and developing grains. {ECO:0000269|PubMed:25995326}. |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor acting as a positive regulator in the ethylene response pathway (PubMed:16786297, PubMed:28829777, PubMed:27701783, PubMed:25995326). Required for the inhibition of root growth by ethylene in etiolated seedlings (PubMed:25995326, PubMed:28829777). Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression (PubMed:28829777). Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae) (PubMed:27701783). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal infection (PubMed:27701783). May enhance disease resistance by facilitating reactive oxygen species (ROS) generation and jasmonate biosynthesis with subsequent phytoalexin accumulation during Magnaporthe oryzae infection (PubMed:27701783). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:16786297, ECO:0000269|PubMed:25995326, ECO:0000269|PubMed:27701783, ECO:0000269|PubMed:28829777, ECO:0000269|PubMed:30002253}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Induced by infection with the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:27701783}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KT156845 | 0.0 | KT156845.1 Zea mays subsp. mays transcription factor EIL1 mRNA, complete cds. |
| Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
Science, 2003. 301(5631): p. 376-9
[PMID:12869764] - Yang C, et al.
MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
Plant Physiol., 2015. 169(1): p. 148-65
[PMID:25995326] - Yang C, et al.
Activation of ethylene signaling pathways enhances disease resistance by regulating ROS and phytoalexin production in rice.
Plant J., 2017. 89(2): p. 338-353
[PMID:27701783] - Qin H, et al.
The activation of OsEIL1 on YUC8 transcription and auxin biosynthesis is required for ethylene-inhibited root elongation in rice early seedling development.
PLoS Genet., 2017. 13(8): p. e1006955
[PMID:28829777] - Kuroha T, et al.
Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
Science, 2018. 361(6398): p. 181-186
[PMID:30002253]
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