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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.9KG076000.2.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
MYB |
Protein Properties |
Length: 403aa MW: 43219.2 Da PI: 6.0033 |
Description |
MYB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.9KG076000.2.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 61 | 2.5e-19 | 55 | 101 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
rg+WT+eEde l+ v+ +G + W++Iar+++ gR +kqc++rw ++l
Pavir.9KG076000.2.p 55 RGPWTEEEDEMLKAMVEVYGDRKWAAIARHLP-GRIGKQCRERWTNHL 101
89******************************.************996 PP
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2 | Myb_DNA-binding | 53.6 | 5.1e-17 | 109 | 151 | 1 | 45 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45
++ WT+e+d l++a+k +G++ W+ Iart+ gR+++++k++w+
Pavir.9KG076000.2.p 109 KNTWTEEDDMNLIEAHKVHGNR-WSMIARTLE-GRSENSVKNHWN 151
679*******************.*********.***********8 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 403 aa
Download sequence Send
to blast |
MLAPGGNIVQ PEGYLAPAPS SLHAAWNGVA AAAGGQQQHL PAGAGSGVLR LPPVRGPWTE 60 EEDEMLKAMV EVYGDRKWAA IARHLPGRIG KQCRERWTNH LRPEIDKAKN TWTEEDDMNL 120 IEAHKVHGNR WSMIARTLEG RSENSVKNHW NATKRSLKAK RRLKKKKNAE APPGQQWSIL 180 EEYIRSLRPD ELAAAPPAPS DDSPPSSYNV GYDGEVVSPP AAPAPAPGGG FDPAALRLYL 240 SAAAAGNSSS AVNNQLAAMN PNMAAPPPYL GLDLNAYYYG APLQQQAPPQ MMMMMSQYQQ 300 QAAADNRSTY PFVDHLAWHS PVPNADAYAT SSNANAAAGQ HYYYNYNSDA GAGPSPAPAP 360 APAPTATAAN PEDDVDVVQM ASREFQLNTS DEEVTLNLAG FV*
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