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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pavir.7NG308300.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
MYB_related |
Protein Properties |
Length: 446aa MW: 48719.5 Da PI: 8.4693 |
Description |
MYB_related family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.7NG308300.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | Myb_DNA-binding | 52.3 | 1.3e-16 | 51 | 95 | 1 | 47 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47
r +WT++E++l+++a +q+G W++I +++g +t+ q++s+ qk+
Pavir.7NG308300.1.p 51 REKWTEDEHKLFLEALQQHGRA-WRRIQEHIG-SKTAVQIRSHAQKF 95
789*****************88.*********.************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 446 aa
Download sequence Send
to blast |
MARFQAMNDQ RPAADRVGHA DFMDHLKRTL DSPEGARAPK ARKPYTISKQ REKWTEDEHK 60 LFLEALQQHG RAWRRIQEHI GSKTAVQIRS HAQKFFSKVI RESSGDSNSI AAPPQIHIPP 120 PRPKRKPAHP YPRKLGNSLC KDASTIKQLE KPQLKIQLLS EQENCSPKSV LTAAQIGSQT 180 METEGSGSPA SSVYMEEKGL TPSTSVGELG VQVALSKDAT TSNGAACGIP EGPVLRLFGK 240 RVVVNNLHQQ PNSNTGNLKH AADMELDSSA ETPTSGTGKF SSHGAEEAKT WSPWLTGTQQ 300 FVYYLPQGEV LSVHSACQFL SYSNGSISYG VLNQQTVASN KQQHQPSQAS DCKFTRAEGS 360 WAESITTSSS VPETTTQNSD SIESTQVNND DDEVIPVPGS RKFLSTVPTY LRGFVPYRKC 420 TAQSKMLQSQ VPGEEADGDM TRLCL*
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