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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.7NG181000.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
EIL |
Protein Properties |
Length: 517aa MW: 56618.9 Da PI: 5.1879 |
Description |
EIL family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.7NG181000.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | EIN3 | 341.7 | 1.6e-104 | 65 | 335 | 2 | 261 |
XXXXXXXXXXXXXXXXXXXXXX..XXXXX.XXXXXXX..................XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
EIN3 2 elkkrmwkdqmllkrlkerkkqlledkeaatgakksn..................ksneqarrkkmsraQDgiLkYMlkemevcnaqGfv 73
+lkkrmwkdq ll++l++r+ + + + + ++++ +++++rrk+m raQDg++++Mlk+me+cna+Gfv
Pavir.7NG181000.1.p 65 DLKKRMWKDQLLLMKLEGRSGRDRGPHPGDGHHQQHQqpaqdqmlasasskdmeeSPENRYRRKAMLRAQDGVIRHMLKMMEACNARGFV 154
8******************998765555443333333788888999999999999999******************************** PP
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS-- CS
EIN3 74 YgiipekgkpvegasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfp 163
Yg + e g pv+g+sdsLr+WWk++v fdr+gp a+ +++ + ++ s h l+++qD+tlgSLLsal+qhc+ppqr+fp
Pavir.7NG181000.1.p 155 YGVVGEDGVPVSGSSDSLRGWWKDDVGFDRAGPLALLAG--------HQEPGSPMAASFLHGLHDIQDSTLGSLLSALIQHCEPPQRSFP 236
**********************************97644........4444445699********************************* PP
TTT--HHHH---S--HHHHHHT.--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTT CS
EIN3 164 lekgvepPWWPtGkelwwgelg.lskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnq 252
l++g++pPWWPtG+e wwg++g ++++qg+ppy+kphdlkkawk+s+L+avikh+sp+++++r+l++qsk+lq+kmsa++ ++++v+ q
Pavir.7NG181000.1.p 237 LDRGLAPPWWPTGQEPWWGTQGeAQAHQGAPPYRKPHDLKKAWKISLLSAVIKHLSPRFDQMRKLVWQSKRLQHKMSARDAETWSRVIAQ 326
**********************9999**************************************************************** PP
TTT-S--XX CS
EIN3 253 eekecatvs 261
ee++ ++ +
Pavir.7NG181000.1.p 327 EEALDRHAQ 335
**9876433 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0005634 | Cellular Component | nucleus |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 517 aa
Download sequence Send
to blast |
MENGEGIDYY QKPAAHAASR PTMDEEEARA KGKAGHPTAE PEPETSQEEF FSDSESGSES 60 IEIADLKKRM WKDQLLLMKL EGRSGRDRGP HPGDGHHQQH QQPAQDQMLA SASSKDMEES 120 PENRYRRKAM LRAQDGVIRH MLKMMEACNA RGFVYGVVGE DGVPVSGSSD SLRGWWKDDV 180 GFDRAGPLAL LAGHQEPGSP MAASFLHGLH DIQDSTLGSL LSALIQHCEP PQRSFPLDRG 240 LAPPWWPTGQ EPWWGTQGEA QAHQGAPPYR KPHDLKKAWK ISLLSAVIKH LSPRFDQMRK 300 LVWQSKRLQH KMSARDAETW SRVIAQEEAL DRHAQRALRI TPIEEEDDDG PDDAGGDSPL 360 AAAHVDKRKR QVGREGVGRG VGAGVDVGKA LLALPDIDCV PDADRSSIDE LMRLYYRCLQ 420 GPDDDGEHEV KGAVAVVGDD DGGQRQHGGG AAAEAAPQMA HHDDMLPHGL LQHGGGAPVH 480 EDDVLLRSLL GVADVVDMSD FPNNPIWQWG FTTDTD*
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Functional Description ? help
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Source |
Description |
UniProt | Putative transcription factor that may be involved in the ethylene response pathway. {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT043083 | 0.0 | BT043083.1 Zea mays full-length cDNA clone ZM_BFc0091K23 mRNA, complete cds. |
GenBank | JX469969 | 0.0 | JX469969.1 Zea mays subsp. mays clone UT3232 EIL-type transcription factor mRNA, partial cds. |