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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pavir.7NG061200.1.p |
| Organism |
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| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
SBP |
| Protein Properties |
Length: 256aa MW: 28571 Da PI: 10.8789 |
| Description |
SBP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pavir.7NG061200.1.p | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | SBP | 50 | 8e-16 | 161 | 204 | 4 | 48 |
STT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSS CS
SBP 4 vegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsr 48
v+gC +dls+ak yh +hkvC++h+k+p vlv+ +eq fCqqC r
Pavir.7NG061200.1.p 161 VPGC-VDLSSAKPYHCHHKVCSMHTKTPRVLVASIEQPFCQQCMR 204
7778.7*************************************98 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 256 aa
Download sequence Send
to blast |
MVNGDSYPLP SHYPDGGGAA PFRPSLRRPL RRRFYLRLRT RPRLNAPELR LHLRPRPPPR 60
LRCPFPAVPS RIQVERWPAW PGWIYGGGSR GEGGSTAAVA VTCPDYGRRP RVLAARWAGV 120
MRTDFAYICA ESGPSGGCIG RQEGKGSGHR WRPVPRRAAM VPGCVDLSSA KPYHCHHKVC 180
SMHTKTPRVL VASIEQPFCQ QCMRKEGSEG LRMTAKKMRR VVYVLDGDDV NISPYNLRVP 240
YYQWLNGFAA DPQAA*
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