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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.7KG407400.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 405aa MW: 45249.5 Da PI: 6.8135 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.7KG407400.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 34.4 | 4.8e-11 | 113 | 150 | 6 | 43 |
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNk 43
+ rr+++NReAAr+sR+RKka+i++Le+ +L + +
Pavir.7KG407400.1.p 113 VLRRLAQNREAARKSRLRKKAYIQQLETSRMKLAQLEQ 150
679************************86555554444 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 405 aa
Download sequence Send
to blast |
MMELYPGYLE DHFNLHKLSI GAAASPPEYM TSAPAVQFAA APIRMGVYER PAPAPVMGMW 60 NSDPFKVDSG QATSGSTVME ADKFDTRLED VPQVALEPAR STDQETSRPP ERVLRRLAQN 120 REAARKSRLR KKAYIQQLET SRMKLAQLEQ ELQRARQQGA YANGNLGDRN LGFTGSMVPG 180 VAAFEIDYSN WVEEQNRHTA ELRSALQGQT TELELRMLVE TGLNNYEHLF RIKALAANSD 240 VFYVTSGVWK TPAERFFLWI GGFRPSEVLK ILRPQLEPLT EAQLMAVGGL QHTSTQAEDA 300 LSQGMEKLQQ NLAETLTAAA DPFGPPDGYM LQMETAVEKL KELVGFVIQA DHLRQTTLQQ 360 MHKILTTRQA ARGLLALGDY FQRLRALSHL WATRPREAPT LSHL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional regulator involved in defense response. {ECO:0000250|UniProtKB:Q7X993}. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Okada A, et al.
OsTGAP1, a bZIP transcription factor, coordinately regulates the inductive production of diterpenoid phytoalexins in rice. J. Biol. Chem., 2009. 284(39): p. 26510-8 [PMID:19635799] - Okada K
The biosynthesis of isoprenoids and the mechanisms regulating it in plants. Biosci. Biotechnol. Biochem., 2011. 75(7): p. 1219-25 [PMID:21737944] - Yamane H
Biosynthesis of phytoalexins and regulatory mechanisms of it in rice. Biosci. Biotechnol. Biochem., 2013. 77(6): p. 1141-8 [PMID:23748776] - Miyamoto K, et al.
Identification of target genes of the bZIP transcription factor OsTGAP1, whose overexpression causes elicitor-induced hyperaccumulation of diterpenoid phytoalexins in rice cells. PLoS ONE, 2014. 9(8): p. e105823 [PMID:25157897] - Miyamoto K, et al.
Overexpression of the bZIP transcription factor OsbZIP79 suppresses the production of diterpenoid phytoalexin in rice cells. J. Plant Physiol., 2015. 173: p. 19-27 [PMID:25462074]
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