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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pavir.7KG301100.1.p |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
Dof |
Protein Properties |
Length: 375aa MW: 37348.4 Da PI: 8.6665 |
Description |
Dof family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pavir.7KG301100.1.p | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | zf-Dof | 124.4 | 3.5e-39 | 74 | 134 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
kekal+cprC+stntkfCyynnysl+qPryfCk+CrryWt+GG+lrnvPvGgg+rknk+s+
Pavir.7KG301100.1.p 74 KEKALNCPRCNSTNTKFCYYNNYSLQQPRYFCKTCRRYWTEGGSLRNVPVGGGSRKNKRST 134
7899******************************************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 375 aa
Download sequence Send
to blast |
MDAAHWQQSL GLVKPMEEML MAANAGAAAN TSQGSNPNPP APSSAAGGGA ALRAPAPPAV 60 AGVGSTERRA RPQKEKALNC PRCNSTNTKF CYYNNYSLQQ PRYFCKTCRR YWTEGGSLRN 120 VPVGGGSRKN KRSTSSSASA SASTSASVTS SSMVTTAGAA SKNPKLAHEG AQDLNLAFPH 180 HGGLHVPEFA AFPSLESSNV CNSGGAMAGN GRGGGGGAGP AVGAFSAMEL LRSSGCYMPL 240 QVPMPMPGDY AAAGFALGEF RAPPPPPPPS QSVLGFSLDA HGPGPGAAAA GYGSSAGLPE 300 NAGRLLFPFE DLKPPVSSGG GGVAAGASGG AGDGNSGHHQ FDHNKEQGGG GPPSAGHDTP 360 GFWNGMIGGS GASW*
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Expression --
Description ? help
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Source |
Description |
Uniprot | DEVELOPMENTAL STAGE: Expressed at low level in germinating seeds 3 to 5 days after imbibition. {ECO:0000269|PubMed:11470159}. |
Functional Description ? help
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Source |
Description |
UniProt | Transcription factor that may transactivate seed storage protein genes in developing seeds. {ECO:0000250|UniProtKB:Q6K537}. |